SNPMiner Trials by Shray Alag


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Report for SNP rs6971

Developed by Shray Alag, 2020.
SNP Clinical Trial Gene

There are 26 clinical trials

Clinical Trials


1 PET Evaluation of Brain Peripheral Benzodiazepine Receptors Using [(11)C]PBR28 in Patients With Multiple Sclerosis (MS)

This study will use positron emission tomography (PET) to measure a brain protein called peripheral benzodiazepine receptor (PBR) in patients with multiple sclerosis. PBR is created during the inflammation process, and brain inflammation is a key feature of multiple sclerosis (MS). PBR usually affects one type of brain cell, but it can also cause damage to surrounding areas of the brain in patients with MS. PET studies of PBRs and brain inflammation may help elucidate the role of these brain cells in patients with MS. Healthy normal volunteers and patients with MS between 18 and 70 years of age may be eligible for this study. Patients with MS must have had onset of disease between 18 and 40 years of age. Patients with MS undergo the following procedures: Visit 1: Medical history, physical examination, blood tests and magnetic resonance imaging (MRI). Visit 2: Blood tests and PET scan. Visits 3 and 4: MRI and physical examination. Visit 5: PET scan and blood tests. Visit 6: MRI and physical examination. Healthy volunteers undergo the following: Visit 1: Medical history, physical examination, blood tests. Visits 2 and 3: PET and blood tests. Magnetic Resonance Imaging MRI uses a magnetic field and radio waves to produce images of body tissues and organs. For this procedure, the subject lies on a table that can slide in and out of the scanner (a metal cylinder), wearing earplugs to muffle loud knocking noises that occur during the scanning process. The procedure lasts about 90 minutes; the patient is asked to lie still for up to 25 minutes at a time. The subject can communicate with the MRI staff at all times during the scan. During part of the scan a contrast agent is administered through a catheter (plastic tube) placed in an arm vein to enhance the images. Positron Emission Tomography (PET) The PET scan gives information on brain and body chemistry and function. The subject lies on a bed that slides in and out of the doughnut-shaped scanner. A catheter is placed in a vein in the arm and another is placed in an artery in the wrist or elbow area. The catheter in the arm is used for injecting a radioactive material that the scanner detects, and the other is used to collect blood samples. A custom-molded plastic mask is used to support the head and prevent it from moving during the procedure. The subject may be asked to perform various tasks during the PET scan or to lie quietly. The scan lasts about 2.5 hours.

NCT00432900 Multiple Sclerosis Radiation: [(11)C]PBR28
MeSH: Multiple Sclerosis Sclerosis

- Homozyous for the low- affinity binding form of TSPO by TSPO genotype analysis ( Ala147Thr polymorphism in rs6971 SNP in exon 4 of the TSPO gene).

HEALTHY VOLUNTEERS - EXCLUSION CRITERIA: Homozyous for the low- affinity binding form of TSPO by TSPO genotype analysis ( Ala147Thr polymorphism in rs6971 SNP in exon 4 of the TSPO gene).

Primary Outcomes

Measure: Correspondence between increased PBR expression measured by [11C]PBR28 PET and gadolinium-enhancing lesions on MRI.

Time: At time of dosing

Measure: Correspondence between increased PBR expression and previously and/or persistently gadolinium-enhancing lesions on MRI.

Time: At time of dosing

Secondary Outcomes

Measure: Correspondence between PBR expression and other MRI defined pathology including T2-weighted hyperintense and T1-weighted hypointense lesions.

Time: Follow-up (~Month 4)

Measure: Correspondence between PBR expression and normal appearing white and gray matter on MRI.

Time: Follow-up (~Month 4)

2 Phase 0 Clinical Protocol: A Longitudinal and Multimodal Exploratory Study to Evaluate a Neuroinflammatory Hypothesis in Patients With Schizophrenia Compared to Young Healthy Subjects

Previous research has suggested central nervous system inflammatory activity to be critically involved in disease development and progression in schizophrenia, with a complex interplay of inflammatory mechanisms leading to the development of brain abnormalities and medical symptoms related to schizophrenia. However, the mutual interactions of different inflammatory pathways and their relation to disease course have not been sufficiently studied. This study therefore aims to explore the interaction of neuroinflammatory mechanisms in patients with schizophrenia and to assess whether the inflammatory activity in schizophrenia is state-dependent and occurs mainly during psychotic episodes.

NCT02009826 Schizophrenia Psychosis Radiation: [18F]-PBR111 Positron Emission Tomography (PET) Behavioral: Cognitive and psychomotor tasks Biological: Blood sampling
MeSH: Schizophrenia Psychotic Disorders Mental Disorders
HPO: Psychosis Schizophrenia

- Low affinity binder of the TSPO, as determined by rs6971 polymorphism genotyping at Screening - Use of benzodiazepines for 3x the half-life prior to PET-scan - Presence of irremovable magnetic materials in or on the body - Has a medical history of organic brain disease - Has a medical history of traumatic brain injury - Has a medical history of allergic reaction to any of the substances in the tracer fluid.

Primary Outcomes

Description: Regional distribution volume in tissue (VT) of 2-(6-chloro-2-(4-(3-fluoropropoxy)phenyl)imidazo(1,2-a)pyridin-3-yl)-N,N-diethylacetamide (PBR111) labelled with fluorine-18 (18F) in schizophrenia patients and age- , gender-, and translocator protein (TSPO) binding profile- matched healthy controls

Measure: Regional VT of [18F]PBR111

Time: 2 years

Secondary Outcomes

Description: Levels and ratios of inflammatory and neurotoxicity markers in blood samples of schizophrenia patients compared to healthy age- and gender-matched healthy controls.

Measure: Peripheral markers

Time: 2 years

3 Non-Invasive Characterization in Cardiac Sarcoidosis

In a study of Cardiac sarcoidosis, a serious heart condition, a radiotracer is being used to examine inflammation.

NCT02017522 Cardiac Sarcoidosis Device: 11C-PBR PET
MeSH: Sarcoidosis

If you have two copies of a genetic variation called rs6971 which will prevent this tracer from generating high-quality images you may not participate.

Primary Outcomes

Description: The primary outcome of this study will be the ratio of 11C-PBR28 PET activity in myocardial regions with inflammation indicated by FDG PET and/or edema indicated by increased T2 signal with cardiac MRI compared to the 11C-PBR28 PET activity in myocardial segments which appear normal on FDG PET and cardiac MRI. The primary outcome is thus the intensity of uptake in abnormal regions as a percentage of the intensity of uptake in normal segments.

Measure: Ratio of 11C-PBR28 in the Myocardium

Time: 1 hour scan

Secondary Outcomes

Description: As a secondary outcome of this study we will evaluate the ratio of 11C-PBR28 PET activity in regions with fibrosis indicated by decreased myocardial perfusion on 82Rb PET and/or late gadolinium enhancement on cardiac MRI without imaging signs of active inflammation compared to 11C-PBR28 PET activity in myocardial segments which appear normal on 82Rb PET, FDG PET and cardiac MRI. This outcome will thus be expressed by 11C-PBR28 PET uptake in fibrotic regions as a percentage of uptake in normal segments We will also evaluate the concordance between extracardiac activity seen in 11C-PBR28 and FDG PET, and when available, histopathology of contemporaneous biopsy specimens.

Measure: The Ratio of 11C-PBR28 PET Activity in Cardiac Regions With Fibrosis

Time: 1 hour scan

4 Reproducibility of the 11C-PBR28 PET Signal

The Translocator Protein (TSPO) is a protein which reaches very high levels when there is inflammation in the brain. Recently, radioligands have been developed which attach to the TSPO (a radioligand is a drug which has been tagged with radioactivity). Using positron emission tomography (PET) imaging, the radioligand can be detected following injection into a patient. However, it is difficult to accurately measure the amount of TSPO using PET at the moment. This is because the brain does not have a "reference region" for TSPO (ie an area in the brain with no TSPO at all). "Reference regions" are very useful to help work out how much of a PET signal represents "specific binding" (of the radioligand to the target of interest), and how much represents "non specific binding" (of the radioligand to many other structures which are not of interest). In the absence of a reference region, non specific binding can be estimated by giving a drug which binds to the TSPO. The drug prevents the radioligand binding the TSPO and (in a manner of speaking) "creates" a temporary reference region so non specific binding can be measured. To do this, we will use XBD173 (Emapunil is an anxiolytic drug which acts as a selective agonist at the peripheral benzodiazepine receptor) to bind TSPO and block binding of the PET ligand ([11C]PBR28), a TSPO ligand from the phenoxyarlyacetamide class. Most TSPO PET studies (and in one of our previous studies approved by West London REC) quantify the signal using a ratio of specific binding in the brain to radioactivity in the blood. This requires arterial line insertion which is burdensome for subjects, and increases variability. In this study we aim to determine the ratio of specific binding in the brain to nonspecific binding in the brain by using the temporary reference region. For more accuracy the participants will repeat the scanning procedure so determine test-retest variability of the amount of TSPO.

NCT02086240 Neurodegenerative Disorders Drug: XBD173
MeSH: Neurodegenerative Diseases
HPO: Neurodegeneration

Participants will be screened to determine TSPO genotype at the rs6971 polymorphism from a venous blood sample.. To determine test re-test variability of both BPND and VT for [11C]PBR28 in healthy volunteers and MS patients.. Determination of test re-test variability of both BPND and VT for 11CPBR28 in healthy volunteers and MS patients.

Primary Outcomes

Description: Participants will be screened to determine TSPO genotype at the rs6971 polymorphism from a venous blood sample.

Measure: TSPO Binding Status

Time: Baseline/Screening visit

Other Outcomes

Description: Determination of test re-test variability of both BPND and VT for 11CPBR28 in healthy volunteers and MS patients. Subjects will receive a baseline 11C-PBR28 scan, and then a repeat scan following an oral dose of 90mg XBD173 (Emapunil). Both VT and BPND will be determined. Subjects will then return approximately 10 days later for a repeat of these procedures.

Measure: To determine test re-test variability of both BPND and VT for [11C]PBR28 in healthy volunteers and MS patients.

Time: 1st and 2nd Study Visit (approximately 10 days after the 1st study visit)

5 Assessment of [11C]ER-176 to Image Translocator Protein in Brain and Whole-Body of Healthy Subjects

Background: - A protein called translocator protein may play a role in brain inflammation. Sometimes it is present at higher levels in the lungs than in the brain. Researchers want to see if a drug called [11C]ER176 can provide an image of this protein in the brain. Objective: - To test the ability of a drug to image a protein, and test how it is distributed in the body. Eligibility: - Healthy adults over age 18. Design: - Participants will be screened with medical history, physical exam, and blood and urine tests. - Participants will have a PET scan of the brain using [11C]ER176. It will be injected through an intravenous tube into 1-2 arm veins. A tube may also be put into an artery at the wrist or elbow. Some participants will also have a lung scan. - For the PET, participants will lie on a bed that slides in and out of a doughnut-shaped scanner. A plastic mask will be molded to their face and head. They may be wrapped with restraining sheets. The scan will last about 120 minutes. Blood may be taken during the scan. - Blood and urine will be taken before and after the scan. - During another visit, participants will have an MRI scan of the brain. Participants will lie on a table that slides in and out of a metal cylinder. A strong magnetic field and radio waves will take pictures of the brain. The scanner makes loud knocking noises. Participants will be given earplugs. - Some participants will have only a whole-body PET scan using [11C]ER176.

NCT02147392 Pharmacokinetics Adult Drug: [11C]ER-176

Although [(11)C]PBR28 has high in vivo specific signal, it is very sensitive to the high and low affinity states of TSPO, which are caused by the rs6971 single nucleotide polymorphism (SNP) in the fourth exon of the TSPO gene resulting in a nonconservative alanine-to-threonine substitution in position 147 of the encoded TSPO protein.

Primary Outcomes

Measure: The identifiability and time stability of distribution volume calculated with compartmental modeling and evaluate the genotype sensitivity of [11C]ER-176

Time: 1 year

Secondary Outcomes

Measure: Whole-body biodistribution and dosimetry of [11C]ER-176.

Time: 1 year

6 Brain Inflammation and Function in Alcoholism

Background: - Brain inflammation due to high alcohol intake may affect thinking, memory, and concentration. Researchers want to measure this using positron emission tomography (PET). Objective: - To study how excessive alcohol consumption affects brain function. Eligibility: - Adults 30-75 years old who are moderate or severe alcohol drinkers. - Healthy volunteers. Design: - Participants will be screened with medical history, physical exam, interview, and blood and urine tests. Their breath will be tested for alcohol and recent smoking. - Phase 1: - Participants will stay in the hospital 3 days. They will have blood and heart tests and daily urine tests. - A small plastic tube will be inserted by needle in each arm. One will go in a vein, the other in an artery. - Participants will have 2 PET scans with 2 different radioactive compounds. Participants will lie on a bed that slides in and out of the scanner with a cap on their head. - Participants will have magnetic resonance imaging (MRI) scans. Participants will lie in the scanner either resting with their eyes open or while performing an attention task. - Participants will have tests of memory, attention, concentration, and thinking. They may answer questions, take tests, and perform simple actions. - Phase 2 of the study will only be done if Phase 1 results show brain inflammation. - Phase 2 will repeat Phase 1. - For healthy volunteers, Phase 2 will begin 3 weeks after Phase 1. - Other volunteers must not have alcohol for at least 3 weeks and stay in a hospital up to 4-6 weeks between Phase 1 and Phase 2. After Phase 2, they will have 5 follow-up calls over 3 months.

NCT02233868 Alcohol Use Disorder (AUD) Other: connectivity Other: neuroinflammation Drug: neurofunction
MeSH: Encephalitis Inflammation Alcoholism Alcohol Drinking
HPO: Encephalitis

Homozygosity for the rs6971 polymorphism on TSPO that results in LB (Owen et al 2011) (genotyping results).

Primary Outcomes

Description: To assess if there is inflammation detected in the brain of alcoholics subjects as measured with [11C]PBR28 as compared to healthy controls.

Measure: To assess inflammation in the brain

Time: end of study

Description: To assess if there is neuroinflammation detected in the brain of alcoholics subjects as measured with [11C]PBR28 as compared to healthy controls and if it recovers with at least 3 weeks of abstinence.

Measure: To determine if there is neuroinflammation in the brain.

Time: end of study

Description: We want to see whether [11C] PBR28 uptake in the brain reflects levels similar to controls after at least 3 weeks of alcohol abstinence.

Measure: To assess between group differences in inflammation in the brain of AUD subjects in Phase II who either abstain from alcohol for at least 3 weeks or relapse (continue to drink alcohol) for at least 3 weeks.

Time: end of study

Secondary Outcomes

Description: to assess if neuroinflammation is associated with markers of brain function and to evaluate if neuroinflammation predicts relapse in AUD over a 3 month follow-up period.

Measure: To assess the impact of neuroinflammation on brain function (assessed with PET and 18FDG and with MRI for fMRI with task activation and for functional connectivity).

Time: end of study

7 Biomarkers of Neuroinflammation and Anti-Inflammatory Treatments in Major Depressive Disorder

The purpose of this study is to determine if translocator protein total distribution volume (TSPO VT) is elevated in major depressive disorder that is not responding to medication and if adding minocycline can affect TSPO VT. Many remain treatment resistant with common antidepressant treatments and the investigators think it may be due to poor targeting of brain pathologies.

NCT02362529 Major Depressive Disorder Drug: Minocycline Drug: Placebo Drug: Celecoxib
MeSH: Depressive Disorder Depression Depressive Disorder, Major
HPO: Depressivity

The priority of the genetic sample is to analyze the alleles of polymorphism rs6971 which has an association with the affinity of most second generation TSPO ligands including [18F]FEPPA.

Primary Outcomes

Description: TSPO VT will be measured using [18F]FEPPA positron emission tomography brain scans. Eligible MDE participants will be randomized to either minocycline or placebo. Following 8 weeks of either minocycline or placebo treatment, MDE participants will have a second PET scan .

Measure: Translocator total distribution volume (TSPO VT): Treatment Effect of Minocycline in MDE Subjects

Time: Pre- and post-minocycline or placebo treatment= 8 weeks total between pretreatment and posttreatment scans

Description: Compare baseline TSPO VT prior to treatment between MDE group and healthy group

Measure: Translocator total distribution volume (TSPO VT): Difference between MDE and healthy subjects

Time: Pre-treatment scan will take place up to 8 weeks from initial assessment

Secondary Outcomes

Description: Change in HDRS score following minocycline vs. placebo treatment. Change in HDRS score following celecoxib treatment.

Measure: Change in Hamilton Depression Rating Scale Score

Time: Pre- and post-minocycline treatment (8 weeks total between pre- and post-treatment). Pre- and post-celecoxib treatment (8 weeks total between pre- and post-treatment).

Other Outcomes

Description: To assess verbal memory we will administer the Hopkins Verbal Learning Test-Revised to MDE participants before and after treatment.

Measure: Hopkins Verbal Learning Test-Revised

Time: Pre- and post-minocycline or placebo treatment (8 weeks between pre- and post-treatment measure)

Description: To assess visuospatial memory we will administer the Brief Visuospatial Memory Test-Revised to MDE participants before and after treatment.

Measure: Brief Visuospatial Memory Test-Revised

Time: Pre- and post-minocycline or placebo treatment (8 weeks between pre- and post-treatment measure)

Description: To assess psychomotor speed and attention we will administer the Comprehensive Trails Making Test to MDE participants before and after treatment.

Measure: Comprehensive Trails Making Test

Time: Pre- and post-minocycline or placebo treatment.

Description: The priority of the genetic sample is to analyze the alleles of polymorphism rs6971 which has an association with the affinity of most second generation TSPO ligands including [18F]FEPPA. The genetic sample will also be used to study sequences of genes that are believed to affect TSPO expression, inflammation, mood and conditions that may predispose to mood disorders.

Measure: Genetic sample

Time: Phase 1-single sample

Description: Analyses will include complete blood cell count (CBC), ESR, hepatic and renal function. Peripheral marker analyses will include proteins related to TSPO expression and inflammation. Plasma minocycline and celecoxib levels will be analyzed.

Measure: Blood samples (serum and plasma)

Time: Pre- and post-minocycline or placebo treatment (8 weeks between measures). Pre- and post-celecoxib treatment (8 weeks between measures).

8 Imaging and BioFluid Biomarkers in Amyotrophic Lateral Sclerosis

This is a multicenter, 18-month study, which aims to identify imaging and biofluid biomarkers in people with ALS to expand the understanding of ALS pathology, treatment targets, disease progression, and anatomical differences between different disease phenotypes. This pilot project is tailored to produce imaging tools that will allow researchers to conduct future ALS clinical trials more efficiently which may in turn impact the pace for ALS drug discovery.

NCT02559869 Amyotrophic Lateral Sclerosis (ALS) Drug: [18F] GE-180
MeSH: Motor Neuron Disease Amyotrophic Lateral Sclerosis Sclerosis
HPO: Abnormal anterior horn cell morphology Amyotrophic lateral sclerosis

The presence of unstable psychiatric disease, cognitive impairment, or dementia that would impair ability of the subject to provide informed consent, according to SI judgment 7. Pregnant women or women currently breastfeeding 8. Anything that, in the opinion of the investigator, would place the subject at increased risk or preclude the subject's full compliance with or completion of the study In addition, any subject meeting any of the following criteria during screening evaluations will be excluded from entry into the PET portion of the study: 1. Radiation exposure that exceeds the site's current guidelines 2. Low affinity TSPO binders determined by having a Thr/Thr polymorphism in the TSPO gene (rs6971) at the Screening Visit Women of Childbearing Potential (WOCBP) For the purposes of this study, women of child bearing potential are defined as all women who are capable of becoming pregnant, unless they meet one of the following criteria: - 12-months post-menopausal - Post-hysterectomy - Surgically sterile Inclusion Criteria Study subjects meeting all of the following criteria will be allowed to enroll in the study: 1.

The presence of unstable psychiatric disease, cognitive impairment, or dementia that would impair ability of the subject to provide informed consent, according to SI judgment 7. Pregnant women or women currently breastfeeding 8. Anything that, in the opinion of the investigator, would place the subject at increased risk or preclude the subject's full compliance with or completion of the study In addition, any subject meeting any of the following criteria during screening evaluations will be excluded from entry into the PET portion of the study: 1. Radiation exposure that exceeds the site's current guidelines 2. Low affinity TSPO binders determined by having a Thr/Thr polymorphism in the TSPO gene (rs6971) at the Screening Visit Women of Childbearing Potential (WOCBP) For the purposes of this study, women of child bearing potential are defined as all women who are capable of becoming pregnant, unless they meet one of the following criteria: - 12-months post-menopausal - Post-hysterectomy - Surgically sterile Amyotrophic Lateral Sclerosis (ALS) Motor Neuron Disease Amyotrophic Lateral Sclerosis Sclerosis In this trial, approximately 200 subjects will participate in this study from 2 Northeast ALS Consortium (NEALS) centers in the United States.

Primary Outcomes

Description: Aim 1 will be accomplished by obtaining [18F] GE-180 PET imaging from 25 people with ALS compared to 25 age, gender, and binding affinity matched healthy volunteers.

Measure: Measure & localize brain inflammation in people with ALS via [18F] GE-180 PET imaging.

Time: 12 months

Description: Aim 1 will be accomplished by obtaining state of-the-art MRI acquisition sequences from 50 people with ALS compared to 50 MRI age- and gender-matched healthy volunteers.

Measure: Define anatomical, structural, and functional changes in the brain via MRI of ALS Subjects vs. Healthy Controls at Baseline

Time: 12 months

Description: Blood from 100 subjects will be studied to quantitate circulating pro- and anti-inflammatory monocyte/macrophage and T cells, with results to be correlated with neuroimaging and evaluated as potential biomarkers of disease progression.

Measure: Determine systemic inflammatory factors that may modify the progression or other clinical or imaging correlates of ALS.

Time: 12 months

Secondary Outcomes

Description: Clinical and [18F] GE-180 PET imaging data will be collected every 6 months from the 25 people with ALS for at least 12 months.

Measure: Determine the longitudinal changes in brain inflammation in people with ALS in correlation with ALS severity and rate of progression.

Time: 12 months

Description: Clinical and MRI data will be collected every 3 months from 50 people with ALS for at least 12 months.

Measure: Determine the longitudinal changes in the anatomical, structural, and functional measures in people with ALS, and build ALS prediction models using the clinical and MRI data.

Time: 12 months

9 A [C-11]-PBR28 Positron Emission Tomography Study to Evaluate the Effect of ABT-555 on Central Nervous System Inflammation in Subjects With Relapsing Forms of Multiple Sclerosis

This open-label positron emission tomography (PET) study is designed to determine the effect of ABT-555 on translocator protein expression level in participants with relapsing forms of multiple sclerosis.

NCT02606630 Multiple Sclerosis Drug: ABT-555
MeSH: Multiple Sclerosis Sclerosis

Inclusion Criteria: Diagnosis of relapsing-remitting MS (RRMS) or relapsing secondary progressive MS (SPMS) Neurologically stable at Screening, in the investigator's judgment and not actively experiencing or recovering from a recent relapse in the 30 days preceding the Screening Visit A Kurtzke Expanded Disability Status Scale (EDSS) score of 1.0 to 6.0, inclusive at the Screening Visit High or mixed affinity binder of the TSPO, as determined by rs6971 polymorphism genotyping at screening Exclusion Criteria: Diagnosis of primary progressive or non-relapsing secondary progressive MS Smoking more than 10 cigarettes per day or use of a nicotine patch Known history of, or positive screening test result for hepatitis C virus or hepatitis B virus Varicella or herpes zoster virus infection or any severe viral infection within 6 weeks before Screening Any type of live virus vaccine from 4 weeks before randomization History of abnormal laboratory results Inclusion Criteria: Diagnosis of relapsing-remitting MS (RRMS) or relapsing secondary progressive MS (SPMS) Neurologically stable at Screening, in the investigator's judgment and not actively experiencing or recovering from a recent relapse in the 30 days preceding the Screening Visit A Kurtzke Expanded Disability Status Scale (EDSS) score of 1.0 to 6.0, inclusive at the Screening Visit High or mixed affinity binder of the TSPO, as determined by rs6971 polymorphism genotyping at screening Exclusion Criteria: Diagnosis of primary progressive or non-relapsing secondary progressive MS Smoking more than 10 cigarettes per day or use of a nicotine patch Known history of, or positive screening test result for hepatitis C virus or hepatitis B virus Varicella or herpes zoster virus infection or any severe viral infection within 6 weeks before Screening Any type of live virus vaccine from 4 weeks before randomization History of abnormal laboratory results Multiple Sclerosis Multiple Sclerosis Sclerosis null

Primary Outcomes

Description: Compare 2 dynamic positron emission tomography scans to examine the effect of a single administration of ABT-555 on translocator protein expression

Measure: Change in translocator protein expression

Time: Day 0 and 109 days

10 Pilot Study of Positron Emission Tomography (PET) Imaging: Correlations With Advanced Magnetic Resonance Imaging in Multiple Sclerosis

Traditional Magnetic Resonance Imaging (MRI) in Multiple Sclerosis (MS) has enabled clinicians to measure disease activity but there are inherent limitations. Clinical/radiographic dissociation can be seen in some patients and the abnormalities are not specific. This pilot study is an opportunity to determine the relationship between quantitative advanced MRI measures and OCT with PET measurements of microglial activation and myelin health.

NCT02869360 Multiple Sclerosis
MeSH: Multiple Sclerosis Sclerosis

- Aged 18 to 60 - High or mixed affinity binder to rs6971 TSPO polymorphism Exclusion Criteria: - Pregnant or breastfeeding - Suffering from an unstable medical condition - Have a neurological or ocular disorder other than MS - Any contra-indications to MRI Inclusion Criteria: - Diagnosed with Multiple Sclerosis according to the 2011 McDonald criteria.

- Aged 18 to 60 - High or mixed affinity binder to rs6971 TSPO polymorphism Exclusion Criteria: - Pregnant or breastfeeding - Suffering from an unstable medical condition - Have a neurological or ocular disorder other than MS - Any contra-indications to MRI Multiple Sclerosis Multiple Sclerosis Sclerosis null

Primary Outcomes

Measure: Whole Brain PBR28 binding

Time: Baseline

Secondary Outcomes

Measure: Lesional PiB binding

Time: Baseline

Measure: Myelin Water Imaging

Time: Baseline

Measure: MR Spectroscopy (Total NAA, NAA/Cr, mI)

Time: Baseline

Measure: Optical Coherence Tomography (RNFL thickness)

Time: Baseline

11 Targeting Microglial Activation for Treatment of Autism Spectrum Disorder (ASD): A Proof-of-Concept, Target-Engagement Study

Autism spectrum disorders (ASD) are highly disabling, persistent neurodevelopmental disorders. There are no available treatments for core symptoms of ASD or biologically-based clinical biomarkers. Emerging evidence indicates that levels of brain inflammation are increased in ASD. In particular, recent work implicates hyperactivity of microglial cells, the resident immune cells of the brain. However, the functional consequences of microglial activation remain unknown. This study will measure microglial activation in ASD using positron emission tomography (PET) brain imaging. Adult males with ASD (n=15) and healthy controls (n=15) will be recruited for this study and undergo comprehensive clinical and behavioral baseline assessment. All subjects will then undergo baseline PET imaging using a radiotracer that labels activated microglia. Subjects with ASD will then undergo 12-week open label treatment with minocycline, an FDA-approved antibiotic thought to block microglial activation. PET imaging will be repeated at 12 weeks to confirm target engagement. A subset of control subjects will also undergo repeat PET imaging to determine test-retest reliability. During minocycline treatment, ASD subjects will be evaluated every 2 weeks for safety, clinical impression, behavioral functioning, and measures of cognition. Results will provide important information regarding the relationship between levels of brain inflammation, cognitive and behavioral function in ASD.

NCT03117530 Autism Spectrum Disorder Drug: Minocycline
MeSH: Autistic Disorder Autism Spectrum Disorder
HPO: Autism Autistic behavior

hepatic, neurologic, renal disease) to increase risk to the subject 3. Presence of severe behavioral disturbance likely to require initiation of treatment during the course of the protocol 4. Clinical judgment of the study physician of inability to perform the requirements of the study 5. Current or recent (past 30 days) treatment with minocycline or related compounds, immunosuppressives, or benzodiazepines 6. Homozygous genotype for minor allele of rs6971 7. History of recent febrile illness in past 30 days 8. History of allergic reactions to tetracycline antibiotics 9. Concomitant medication treatment not stable for the 4 weeks prior to study entry or anticipated to change 10.

hepatic, neurologic, renal disease) to increase risk to the subject 4. Presence of current or lifetime severe psychopathology potentially confounding assessment of TSPO binding (psychosis, severe depression, bipolar disorder, Obsessive-Compulsive Disorder) 5. Current prescribed medication likely to confound assessment of TSPO binding 6. Clinical judgment of the study physician of inability to perform the requirements of the study 7. Current or recent (past 30 days) treatment with minocycline or related compounds, immunosuppressives, benzodiazepines, or psychotropic medications likely to confound assessment of TSPO binding 8. Homozygous genotype for minor allele of rs6971 9. SRS-2 T-score score of >59 10.

Primary Outcomes

Measure: Evaluate differences in CNS microglial activation in adults with ASD versus healthy volunteers via in vivo CNS binding of [11C]-DAA1106

Time: Data will be collected at PET scan #1, which will take place during screening (Days -28 to 0) for the study

Measure: Evaluate the effect of 12-weeks of minocycline exposure on CNS microglial activation in adults with ASD by measuring change in [11C]-DAA1106 binding pre- and post- treatment

Time: Data will be collected at PET scan #1 (between days -28 and 0 before intervention) and at PET scan #2 during Week 12 of intervention

Secondary Outcomes

Measure: Effect of minocycline exposure on cognition across seven cognitive domains before and after low dose intervention and regular dose intervention as measured by MCCB (MATRICS Consensus Cognitive Battery) subdomain scores

Time: Data will be collected at baseline and during Weeks 6 and 12 of intervention

Measure: Effect of minocycline exposure on self-rated anxiety and emotion regulation as measured by ADAMS (Anxiety and Depression Mood Scale)

Time: Data will be collected at baseline and during Weeks 6 and 12 of intervention

Measure: Effect of minocycline exposure on peripheral inflammatory cytokine profiles as measured by DNA and RNA expression in blood samples

Time: Data will be collected PET #1 (week 0) and at PET scan #2 (Week 12)

Other Outcomes

Measure: Change in clinician-rated global improvement as measured by CGI

Time: Data will be collected at Screening Visit #1 (between days -28 and 0 before intervention) and at visits during Weeks 6 and 12 of intervention

Measure: Change in self-reported symptoms of ASD with minocycline treatment as measured by SRS-2

Time: Data will be collected at Screening Visit #1 (between days -28 and 0 before intervention) and at visits during Weeks 6 and 12 of intervention

Measure: Change in informant-reported symptoms of ASD with minocycline treatment as measured by ABC-CV

Time: Data will be collected at Screening Visit #1 (between days -28 and 0 before intervention) and at visits during Weeks 6 and 12 of intervention

12 Brain Microglial Activation in the Early Stage of the Parkinson's Disease: a Predictive Biomarker of the Evolution?

Phase II, Open-labeled, Prospective, Multi-center study of assessing the link between microglial activation and dopaminergic denervation kinetics in the early stage of Parkinson disease, by using the imaging of [18F]DPA-714 a new ligand of Translocator Protein-18 kDa (TSPO) by Positron Emission Tomography (PET).

NCT03230526 Parkinson Disease Drug: [18F]DPA-714 PET scan
MeSH: Parkinson Disease

Exclusion Criteria: - Pregnant woman - Minor - Adult protected by the law - Contraindication to PET-scan - Contraindication to brain MRI - History of inflammatory or dysimmune chronic disease - History of psychiatric disease or drug addiction - History of cognitive disorders (MMS<26) - Hypersensibility to iodine derivates or one of these components - Long-term Treatments which can interfere in neuroinflammation process - Treatments / substances susceptible to interfere with the 18F-DPA-714 - TSPO gene Polymorphisms rs6971 corresponding to groups of affinity of low affinity (LAB=Low Affinity Binder) or moderated MAB = Mixed Affinity Binder) - Modification of diagnosis of Parkinson disease during follow-up, in particular towards an atypical parkinson-like syndrome Inclusion Criteria: - Patients having a Parkinson's disease diagnosed according to the criteria UKPDSBB.

Exclusion Criteria: - Pregnant woman - Minor - Adult protected by the law - Contraindication to PET-scan - Contraindication to brain MRI - History of inflammatory or dysimmune chronic disease - History of psychiatric disease or drug addiction - History of cognitive disorders (MMS<26) - Hypersensibility to iodine derivates or one of these components - Long-term Treatments which can interfere in neuroinflammation process - Treatments / substances susceptible to interfere with the 18F-DPA-714 - TSPO gene Polymorphisms rs6971 corresponding to groups of affinity of low affinity (LAB=Low Affinity Binder) or moderated MAB = Mixed Affinity Binder) - Modification of diagnosis of Parkinson disease during follow-up, in particular towards an atypical parkinson-like syndrome Parkinson Disease Parkinson Disease The Parkinson's disease ( MP) is a frequent but heterogeneous neurodegenerative disease in term of clinical presentation(display) and evolutionary profile.

Primary Outcomes

Description: Coefficient of correlation between the striatal microglial activation level measured by PET imaging [binding potential (BP) of 18F-DPA-714 in the striatum] and dopaminergic denervation kinetics obtained from two 123I-FP-CIT (DaTscan) scans

Measure: Coefficient of correlation between level of microglial striatal activation and the And the dopaminergic denervation kinetics

Time: 36 months

Secondary Outcomes

Description: Will be estimated by imaging PET with [18F]DPA-714

Measure: Analyze the relationship between the level of microglial activation in the black substance at the early stage of MP and the dopaminergic denervation kinetics

Time: 36 months

Description: The equivalent dose of cumulative L-Dopa

Measure: Evaluate the relation between the level of striatal microglial activation at inclusion and the severity of dopaminergic symptoms (motors)

Time: baseline

Description: The equivalent dose of cumulative L-Dopa

Measure: Evaluate the relation between the level of striatal microglial activation at inclusion and the severity of dopaminergic symptoms (motors)

Time: 18 months

Description: The equivalent dose of cumulative L-Dopa

Measure: Evaluate the relation between the level of striatal microglial activation at inclusion and the severity of dopaminergic symptoms (motors)

Time: 36 months

Description: MDS-UPDRS scale (part III "OFF" - Part III "ON" and part II)

Measure: Evaluate the relation between the level of striatal microglial activation at inclusion and the severity of dopaminergic symptoms (motors)

Time: Baseline

Description: MDS-UPDRS scale (part III "OFF" - Part III "ON" and part II)

Measure: Evaluate the relation between the level of striatal microglial activation at inclusion and the severity of dopaminergic symptoms (motors)

Time: 18 Months

Description: MDS-UPDRS scale (part III "OFF" - Part III "ON" and part II)

Measure: Evaluate the relation between the level of striatal microglial activation at inclusion and the severity of dopaminergic symptoms (motors)

Time: 36 Months

Description: MDS-UPDRS scale (part IV)

Measure: Evaluate the relation between the level of striatal microglial activation at inclusion and the severity of dopaminergic symptoms (motors)

Time: baseline

Description: MDS-UPDRS scale (part IV)

Measure: Evaluate the relation between the level of striatal microglial activation at inclusion and the severity of dopaminergic symptoms (motors)

Time: 18 months

Description: MDS-UPDRS scale (part IV)

Measure: Evaluate the relation between the level of striatal microglial activation at inclusion and the severity of dopaminergic symptoms (motors)

Time: 36 months

Description: QUIP RS

Measure: Evaluate the link between the level of striatal microglial activation at inclusion and:the severity of dopaminergic symptoms (non-motors)

Time: baseline

Description: QUIP RS

Measure: Evaluate the link between the level of striatal microglial activation at inclusion and:the severity of dopaminergic symptoms (non-motors)

Time: 18 months

Description: QUIP RS

Measure: Evaluate the link between the level of striatal microglial activation at inclusion and:the severity of dopaminergic symptoms (non-motors)

Time: 36 months

Description: MDS-UPDRS scale (part III ON : 3.1 ; 3.2 ; 3.9 to 3.13)

Measure: Evaluate the relation between the level of striatal microglial activation at inclusion and the severity of symptoms considered mainly non-dopaminergic (motor)

Time: baseline

Description: MDS-UPDRS scale (part III ON : 3.1 ; 3.2 ; 3.9 to 3.13)

Measure: Evaluate the relation between the level of striatal microglial activation at inclusion and the severity of symptoms considered mainly non-dopaminergic (motor)

Time: 18 months

Description: MDS-UPDRS scale (part III ON : 3.1 ; 3.2 ; 3.9 to 3.13)

Measure: Evaluate the relation between the level of striatal microglial activation at inclusion and the severity of symptoms considered mainly non-dopaminergic (motor)

Time: 36 months

Description: MDS-UPDRS scale (part II : 2.13 and part III : 3.11)

Measure: Evaluate the relation between the level of striatal microglial activation at inclusion and the severity of symptoms considered mainly non-dopaminergic (motor)

Time: baseline

Description: MDS-UPDRS scale (part II : 2.13 and part III : 3.11)

Measure: Evaluate the relation between the level of striatal microglial activation at inclusion and the severity of symptoms considered mainly non-dopaminergic (motor)

Time: 18 months

Description: MDS-UPDRS scale (part II : 2.13 and part III : 3.11)

Measure: Evaluate the relation between the level of striatal microglial activation at inclusion and the severity of symptoms considered mainly non-dopaminergic (motor)

Time: 36 months

Description: MDS-UPDRS scale (part I)

Measure: Evaluate the relation between the level of striatal microglial activation at inclusion and the severity of symptoms considered mainly non-dopaminergic (non-motor)

Time: Baseline

Description: MDS-UPDRS scale (part I)

Measure: Evaluate the relation between the level of striatal microglial activation at inclusion and the severity of symptoms considered mainly non-dopaminergic (non-motor)

Time: 18 months

Description: MDS-UPDRS scale (part I)

Measure: Evaluate the relation between the level of striatal microglial activation at inclusion and the severity of symptoms considered mainly non-dopaminergic (non-motor)

Time: 36 months

Description: NMS SCALE

Measure: Evaluate the relation between the level of striatal microglial activation at inclusion and the severity of symptoms considered mainly non-dopaminergic (non-motor)

Time: baseline

Description: NMS SCALE

Measure: Evaluate the relation between the level of striatal microglial activation at inclusion and the severity of symptoms considered mainly non-dopaminergic (non-motor)

Time: 18 months

Description: NMS SCALE

Measure: Evaluate the relation between the level of striatal microglial activation at inclusion and the severity of symptoms considered mainly non-dopaminergic (non-motor)

Time: 36 months

Description: Scopa-Aut Score

Measure: Evaluate the relation between the level of striatal microglial activation at inclusion and the severity of symptoms considered mainly non-dopaminergic (non-motor)

Time: baseline

Description: Scopa-Aut Score

Measure: Evaluate the relation between the level of striatal microglial activation at inclusion and the severity of symptoms considered mainly non-dopaminergic (non-motor)

Time: 18 months

Description: Scopa-Aut Score

Measure: Evaluate the relation between the level of striatal microglial activation at inclusion and the severity of symptoms considered mainly non-dopaminergic (non-motor)

Time: 36 months

Description: Evaluation of constipation according to Rome III criteria

Measure: Evaluate the relation between the level of striatal microglial activation at inclusion and the severity of symptoms considered mainly non-dopaminergic (non-motor)

Time: Baseline

Description: Evaluation of constipation according to Rome III criteria

Measure: Evaluate the relation between the level of striatal microglial activation at inclusion and the severity of symptoms considered mainly non-dopaminergic (non-motor)

Time: 18 months

Description: Evaluation of constipation according to Rome III criteria

Measure: Evaluate the relation between the level of striatal microglial activation at inclusion and the severity of symptoms considered mainly non-dopaminergic (non-motor)

Time: 36 months

Description: Detection of hypotension

Measure: Evaluate the relation between the level of striatal microglial activation at inclusion and the severity of symptoms considered mainly non-dopaminergic (non-motor)

Time: Baseline

Description: Detection of hypotension

Measure: Evaluate the relation between the level of striatal microglial activation at inclusion and the severity of symptoms considered mainly non-dopaminergic (non-motor)

Time: 18 months

Description: Detection of hypotension

Measure: Evaluate the relation between the level of striatal microglial activation at inclusion and the severity of symptoms considered mainly non-dopaminergic (non-motor)

Time: 36 months

Description: Detection of paradoxical sleep disorder, according to the questionnaire for the detection of REM sleep disorders

Measure: Evaluate the relation between the level of striatal microglial activation at inclusion and the severity of symptoms considered mainly non-dopaminergic (non-motor)

Time: Baseline

Description: Detection of paradoxical sleep disorder, according to the questionnaire for the detection of REM sleep disorders

Measure: Evaluate the relation between the level of striatal microglial activation at inclusion and the severity of symptoms considered mainly non-dopaminergic (non-motor)

Time: 18 months

Description: Detection of paradoxical sleep disorder, according to the questionnaire for the detection of REM sleep disorders

Measure: Evaluate the relation between the level of striatal microglial activation at inclusion and the severity of symptoms considered mainly non-dopaminergic (non-motor)

Time: 36 months

Description: Epworth's Sleepiness Scale

Measure: Evaluate the relation between the level of striatal microglial activation at inclusion and the severity of symptoms considered mainly non-dopaminergic (non-motor)

Time: Baseline

Description: Epworth's Sleepiness Scale

Measure: Evaluate the relation between the level of striatal microglial activation at inclusion and the severity of symptoms considered mainly non-dopaminergic (non-motor)

Time: 18 Months

Description: Epworth's Sleepiness Scale

Measure: Evaluate the relation between the level of striatal microglial activation at inclusion and the severity of symptoms considered mainly non-dopaminergic (non-motor)

Time: 36 Months

Description: UPSIT test

Measure: Evaluate the relation between the level of striatal microglial activation at inclusion and the severity of symptoms considered mainly non-dopaminergic (non-motor)

Time: baseline

Description: UPSIT test

Measure: Evaluate the relation between the level of striatal microglial activation at inclusion and the severity of symptoms considered mainly non-dopaminergic (non-motor)

Time: 36 Months

Description: MoCA score

Measure: Evaluate the relation between the level of striatal microglial activation at inclusion and the severity of symptoms considered mainly non-dopaminergic (non-motor)

Time: Baseline

Description: MoCA score

Measure: Evaluate the relation between the level of striatal microglial activation at inclusion and the severity of symptoms considered mainly non-dopaminergic (non-motor)

Time: 18 Months

Description: MoCA score

Measure: Evaluate the relation between the level of striatal microglial activation at inclusion and the severity of symptoms considered mainly non-dopaminergic (non-motor)

Time: 36 Months

Description: MATTIS scale

Measure: Evaluate the relation between the level of striatal microglial activation at inclusion and the severity of symptoms considered mainly non-dopaminergic (non-motor)

Time: Baseline

Description: MATTIS scale

Measure: Evaluate the relation between the level of striatal microglial activation at inclusion and the severity of symptoms considered mainly non-dopaminergic (non-motor)

Time: 18 Months

Description: MATTIS scale

Measure: Evaluate the relation between the level of striatal microglial activation at inclusion and the severity of symptoms considered mainly non-dopaminergic (non-motor)

Time: 36 Months

Description: Anxiety symptoms assessed using Beck's anxiety inventory

Measure: Evaluate the relation between the level of striatal microglial activation at inclusion and the severity of symptoms considered mainly non-dopaminergic (non-motor)

Time: Baseline

Description: Anxiety symptoms assessed using Beck's anxiety inventory

Measure: Evaluate the relation between the level of striatal microglial activation at inclusion and the severity of symptoms considered mainly non-dopaminergic (non-motor)

Time: 18 months

Description: Anxiety symptoms assessed using Beck's anxiety inventory

Measure: Evaluate the relation between the level of striatal microglial activation at inclusion and the severity of symptoms considered mainly non-dopaminergic (non-motor)

Time: 36 Months

Description: Symptoms of depression assessed using the Beck Depression

Measure: Evaluate the relation between the level of striatal microglial activation at inclusion and the severity of symptoms considered mainly non-dopaminergic (non-motor)

Time: Baseline

Description: Symptoms of depression assessed using the Beck Depression

Measure: Evaluate the relation between the level of striatal microglial activation at inclusion and the severity of symptoms considered mainly non-dopaminergic (non-motor)

Time: 18 Months

Description: Symptoms of depression assessed using the Beck Depression

Measure: Evaluate the relation between the level of striatal microglial activation at inclusion and the severity of symptoms considered mainly non-dopaminergic (non-motor)

Time: 36 Months

Description: Dopaminergic denervation at inclusion will be measured by the binding potential (BP) of ioflupane (123I-FP-CIT) by regions of interest in the caudate and putamen of the striatum

Measure: Evaluate the relation between the level of striatal microglial activation at inclusion and the severity of dopaminergic denervation at baseline (DaTscan initial)

Time: Baseline

Description: MDS-UPDRS scale

Measure: Evaluate the link between the level of microglial activation in the black substance and outcome 3 to outcome 57

Time: 36 Months

Description: QUIP questionnaire

Measure: Evaluate the link between the level of microglial activation in the black substance and outcome 3 to outcome 57

Time: 36 Months

Description: NMS questionnaire

Measure: Evaluate the link between the level of microglial activation in the black substance and outcome 3 to outcome 57

Time: 36 Months

Description: Scopa-Aut Score

Measure: Evaluate the link between the level of microglial activation in the black substance and outcome 3 to outcome 57

Time: 36 Months

Description: Rome III criteria

Measure: Evaluate the link between the level of microglial activation in the black substance and outcome 3 to outcome 57

Time: 36 Months

Description: The level of cortical microglial activation measured by fixation of the radioligand 18F-DPA-714, on some volumes of interest in the brain

Measure: Evaluate the link between the level of striatal microglial activation and the level of activation in other brain regions (black substance, bridge and cortex)

Time: 36 months

Description: Neurologic Evaluation

Measure: Assess the relationship between the level of microglial activation in the extra-striatal cortical (cortex and brain stem) regions and the presence of non-motor and axial motor symptoms.

Time: baseline

Description: Neurologic Evaluation

Measure: Assess the relationship between the level of microglial activation in the extra-striatal cortical (cortex and brain stem) regions and the presence of non-motor and axial motor symptoms.

Time: 18 months

Description: Neurologic Evaluation

Measure: Assess the relationship between the level of microglial activation in the extra-striatal cortical (cortex and brain stem) regions and the presence of non-motor and axial motor symptoms.

Time: 36 months

Description: The serum levels of 13 cytokines will be analyzed

Measure: Evaluate the link between the level of nigrostriatal microglial activation and the serum level of biological markers of inflammation

Time: Baseline

Description: The serum levels of 13 cytokines will be analyzed

Measure: Evaluate the link between the level of nigrostriatal microglial activation and the serum level of biological markers of inflammation Evaluate the relationship between the level of nigrostriatal microglial activation

Time: 18 months

Description: The serum levels of 13 cytokines will be analyzed

Measure: Evaluate the link between the level of nigrostriatal microglial activation and the serum level of biological markers of inflammation

Time: 36 months

Description: Measurement of serum uric acid

Measure: Evaluate the relationship between the level of nigrostriatal microglial activation and the serum uric acid level at 0, 18 and 36 months

Time: Baseline

Description: Measurement of serum uric acid

Measure: Evaluate the relationship between the level of nigrostriatal microglial activation and the serum uric acid level at 0, 18 and 36 months

Time: 18 months

Description: Measurement of serum uric acid

Measure: Evaluate the relationship between the level of nigrostriatal microglial activation and the serum uric acid level at 0, 18 and 36 months

Time: 36 months

13 Development of Minocycline as a Neuroimmune Therapy for Alcohol Use Disorder

The objective of this proposal is to advance medication development for alcohol use disorder by examining the efficacy and mechanisms of action of minocycline, a neuroimmune modulator, as a potential treatment. This study has important clinical implications, as the available treatments for alcohol use disorder are only modestly effective and testing novel medications is a high research priority.

NCT03244592 Alcohol Use Disorder Inflammation Neurocognitive Dysfunction Craving Alcohol Drinking Drug: Minocycline Drug: Sugar pill
MeSH: Inflammation Alcoholism Alcohol Drinking Cognitive Dysfunction
HPO: Cognitive impairment Mental deterioration

15. low affinity rs6971 genotype Inclusion Criteria: 1. Ages 25 - 45 2. Meet DSM-5 diagnostic criteria for an AUD [n.b., only participants with moderate or severe AUD will be enrolled] 3. Drink ≥ 48 standard drinks in a 30-day period before enrollment Exclusion Criteria: 1. Currently in treatment for AUD, a history of treatment in the 30 days before enrollment, or currently treatment seeking 2. Current (last 12 months) DSM-V diagnosis of substance use disorder for any psychoactive substances other than alcohol and nicotine 3. Lifetime DSM-V diagnosis of schizophrenia, bipolar disorder, or any psychotic disorder 4. Positive urine screen for narcotics, amphetamines, or sedative hypnotics 5. Serious alcohol withdrawal symptoms as indicated by a score ≥ 10 on the Clinical Institute Withdrawal Assessment for Alcohol-Revised 6. Pregnancy, nursing, or refusal to use reliable method of birth control (if female) 7. A medical condition that may interfere with safe study participation (e.g., unstable cardiac, renal, or liver disease, uncontrolled hypertension or diabetes) 8. AST, ALT, or GGT ≥ 3 times upper normal limit 9. Attempted suicide in the past 3 years and/or serious suicidal intention or plan within the past year 10.

15. low affinity rs6971 genotype Alcohol Use Disorder Inflammation Neurocognitive Dysfunction Craving Alcohol Drinking Inflammation Alcoholism Alcohol Drinking Cognitive Dysfunction The research objective of this project is to advance medication development for AUD by conducting a randomized, double blind, placebo-controlled, neuroimaging study to examine the effects of minocycline on neuroinflammation, alcohol cue reactivity, neurocognitive performance, and alcohol use.

Primary Outcomes

Description: Level of [11C]DAA1106 binding during PET imaging

Measure: Microglial Activation

Time: Change from baseline after 28 days of medication dosing

Description: Alcohol Urge Questionnaire (AUQ)

Measure: Cue-Induced Alcohol Craving

Time: Change from baseline after 28 days of medication dosing

Description: Total drinks consumed

Measure: Alcohol consumption

Time: Day 28 of medication dosing period

Description: Hopkins Verbal Learning Test

Measure: Verbal Learning and Memory

Time: Change from baseline after 28 days of medication dosing

Description: Wisconsin Card Sorting Test

Measure: Set-Shifting

Time: Change from baseline after 28 days of medication dosing

Description: Stop Signal Task

Measure: Response Inhibition

Time: Change from baseline after 28 days of medication dosing

Description: Grooved Pegboard Test

Measure: Manipulative Dexterity

Time: Change from baseline after 28 days of medication dosing

Description: Digit Symbol Substitution Test

Measure: Executive Function

Time: Change from baseline after 28 days of medication dosing

Description: Digit Span

Measure: Memory

Time: Change from baseline after 28 days of medication dosing

Description: WAIS Vocabulary

Measure: Vocabulary

Time: Change from baseline after 28 days of medication dosing

Description: Rey Complex Figure Copy

Measure: Executive Function

Time: Change from baseline after 28 days of medication dosing

Secondary Outcomes

Description: Serum level of cytokines and innate immune receptors

Measure: Peripheral Proinflammatory Marker levels

Time: At baseline (day zero) and after 7, 14, and 21 and 28 days of medication dosing

Description: Symptom count from the alcohol module for the Structured Clinical Interview for DSM-5

Measure: Alcohol Use Disorder Severity

Time: At baseline (day zero) and after 28 days of medication dosing

14 Brain Function and Connectivity in Methamphetamine Dependence: The Link to Neuroinflammation and the Effects of Ibudilast

Addiction to methamphetamine is a serious health problem in the United States. Right now, there are no medications that a doctor can give someone to help them stop using methamphetamine. More research is needed to develop drugs for methamphetamine addiction. Ibudilast (the study drug) is a drug that could help people addicted to methamphetamine.

NCT03341078 Methamphetamine-dependence Drug: Ibudilast Drug: Placebo Oral Tablet

Pre and post differences in brain function will be assessed.. Effects of ibudilast on overall cognitive battery score.. Pre and post differences in overall cognitive battery score will be assessed.. Inclusion Criteria: - abstinent from all drugs and have a negative urine drug screen on test days - Meet diagnosis for recent Methamphetamine-Use Disorder (DSM-V) or does not meet any substance-use disorders Exclusion Criteria: - Known sensitivity to ibudilast - Left handed - MRI contraindications - Clinically significant neurological, endocrine, renal, hepatic, or systemic diseases that would compromise safe participation or confound outcomes - Any psychiatric diagnoses or primary psychotic or mood disorders (past depression diagnoses allowed) - Any drug use disorder diagnosis besides methamphetamine or tobacco - Any recreational or prescriptive use of psychotropic medications - Claustrophobia - Women who are pregnant or breast-feeding - Neurodegenerative diseases that present with neuroinflammation - More than 4 weeks abstinent from methamphetamine - rs6971 genotype that confers low translocator protein (TSPO) binding affinity to prevent unnecessary radiation exposure - Liver disease requiring medication or medical treatment and/or aspartate or alanine aminotransferase levels greater than 3 times the upper limit - Participation in any drug study in the last 3 months Inclusion Criteria: - abstinent from all drugs and have a negative urine drug screen on test days - Meet diagnosis for recent Methamphetamine-Use Disorder (DSM-V) or does not meet any substance-use disorders Exclusion Criteria: - Known sensitivity to ibudilast - Left handed - MRI contraindications - Clinically significant neurological, endocrine, renal, hepatic, or systemic diseases that would compromise safe participation or confound outcomes - Any psychiatric diagnoses or primary psychotic or mood disorders (past depression diagnoses allowed) - Any drug use disorder diagnosis besides methamphetamine or tobacco - Any recreational or prescriptive use of psychotropic medications - Claustrophobia - Women who are pregnant or breast-feeding - Neurodegenerative diseases that present with neuroinflammation - More than 4 weeks abstinent from methamphetamine - rs6971 genotype that confers low translocator protein (TSPO) binding affinity to prevent unnecessary radiation exposure - Liver disease requiring medication or medical treatment and/or aspartate or alanine aminotransferase levels greater than 3 times the upper limit - Participation in any drug study in the last 3 months Methamphetamine-dependence Addiction to methamphetamine is a serious health problem in the United States.

Primary Outcomes

Description: Pre and post differences in brain neuroinflammation will be assessed.

Measure: Effects of ibudilast on neuroinflammation as assessed by magnetic resonance spectroscopy (MRS)

Time: 6 weeks

Description: Pre and post differences in brain neuroinflammation will be assessed.

Measure: Effects of ibudilast on neuroinflammation as assessed by positron emission tomography (PET)

Time: 6 weeks

Description: Pre and post differences in brain function will be assessed.

Measure: Effects of ibudilast on brain function as assessed by magnetic resonance imaging (MRI)

Time: 6 weeks

Secondary Outcomes

Description: Pre and post differences in overall cognitive battery score will be assessed.

Measure: Effects of ibudilast on overall cognitive battery score.

Time: 6 weeks

15 Effect of Modulating Gamma Oscillations by Transcranial Alternating Current Stimulation on Brain Structure and Function in Humans

This study aims to implement an intervention based on multiple, individualized multifocal tACS stimulation sessions based on individual PET and MRI information in patients with amyloid-positive PET with the hope that this leads to microglia activation and decrease in cerebral amyloid and tau depositions in human patients with AD.

NCT03412604 Alzheimer Disease Device: Transcranial Alternating Current Stimulation (tACS)
MeSH: Alzheimer Disease
HPO: Alzheimer disease

- Contraindication for undergoing MRI or receiving TMS or tACS, - >50 mSv of radiation exposure for research within the past year (PET imaging exclusion) - Presence of the Thr/Thr polymorphism in the TSPO gene (rs6971) due to low affinity binding for the PBR 28 (microlgia) PET scan - History of fainting spells of unknown or undetermined etiology that might constitute seizures.

Primary Outcomes

Description: Adverse Events as a result of tACS stimulation will be reported

Measure: Incidence of Treatment-Emergent Adverse Events

Time: Up to 12 weeks

Description: Changes in the amyloid load observed via PET imaging will be evaluated by comparing PET data acquired before and after the 20 tACS sessions

Measure: PET amyloid burden

Time: up to 12 weeks

Description: Changes in the tau deposition observed via PET imaging will be evaluated by comparing PET data acquired before and after the 20 tACS sessions

Measure: PET tau deposition

Time: up to 12 weeks

Secondary Outcomes

Description: Changes in the microglia activation observed via PET imaging will be evaluated by comparing PET data acquired before and after the 20 tACS sessions

Measure: PET Microglia activation

Time: up to 12 weeks

Other Outcomes

Description: Change in Adas-Cog score will be reported, to document a potential clinical benefit of tACS. The scale ranges from a total score of 0-70 with higher score indicating greater cognitive impairment.

Measure: Alzheimer's Disease Assessment Scale -Cog Score

Time: up to 12 weeks

16 UAB Neuroinflammation in Parkinson's Disease - TSPO-PET Substudy

The primary objective of this substudy is to measure the concentration and the regional brain distribution of activated brain microglia/macrophages using the PET ligand [18F]DPA-714 in participants enrolled in the UAB Neuroinflammation in PD study. The PET tracer [18F]DPA-714 binds to the 18 kDa translocator protein (TSPO, also known as the peripheral benzodiazepine receptor) in the mitochondria of activated microglia/macrophages and provides a non-invasive measure of neuroinflammation. The amount and distribution of [18F]DPA-714 in the brain will be correlated to clinical data acquired through the separate ongoing Neuroinflammation in PD study. The primary objective of this study is to determine if patients with PD have higher levels of neuroinflammation than healthy controls as measured with [18F]DPA-714-PET/MRI.

NCT03457493 Parkinson Disease Drug: DPA-714-PET/MRI
MeSH: Parkinson Disease

3. High or mixed affinity binder for TSPO ligands based on genotyping for single nucleotide polymorphism (SNP) rs6971.

4. Low affinity binder for TSPO ligands based on genotyping for SNP rs6971.

Primary Outcomes

Description: Estimates of brain TSPO concentrations measured with PET will serve as a marker for neuroinflammation. TSPO-PET measures will be compared between PD patients and healthy controls. We expect the PD patients to have higher measures of neuroinflammation than healthy controls.

Measure: Comparison of TSPO-PET measures of neuroinflammation between PD patients and healthy controls.

Time: 2 years

Description: The estimates of neuroinflammation measured with TSPO-PET will be correlated with clinical assessments of PD severity and biospecimens collected through the UAB Neuroinflammation in PD study.

Measure: Correlation of DPA-714-PET/MRI with demographics, clinical and biospecimen assessments from Neuroinflammation in PD study

Time: 2 years

17 The Relationship Between Neuropsychological Testing and MRI, PET and Blood Biomarkers in Neurodegenerative Disease (COBRE - Project 1): AIM 2

The complex pathological cascades leading to both Alzheimer's disease (AD) and Parkinson's disease (PD) involve, at various points, inflammation. Since inflammation is a treatable symptom, understanding how and when it impacts the brain, and where specifically in the brain, would offer important guidance in the development of new treatments, sorely needed in both diseases. Microglia play an important anti-inflammatory role, and produce a substance, mitochondrial translocator protein (TSPO), whose presence can be used as a marker of regional inflammation. GE180 is a newly developed PET ligand which binds to TSPO and hence can be used in imaging studies to analyze regional inflammation in living patients. In prior studies it has shown regional specificity in multiple sclerosis and brain injury. In the current study, the investigators will be using GE180 to analyze regional and global inflammation in the brains of patients with AD and PD at two time points. The results of the current study will provide enriched understanding of inflammation in these conditions, and potentially provide preliminary data to inform design of future interventional trials.

NCT03702816 Alzheimer Disease Parkinson Disease Inflammation Diagnostic Test: GE180 PET Scan
MeSH: Parkinson Disease Alzheimer Disease Inflammation
HPO: Alzheimer disease

For MCI patients, fit criteria based in Movement Disorders Task Force or NIA Exclusion Criteria: 1. Significant neurological disorders other than AD or PD; 2. Unstable medical conditions 3. History of major psychiatric diseases 4. MRI evidence of infarction or other focal lesion or multiple lacunes 5. Clinically significant abnormalities in B12 or TSH 6. Identified as having a common polymorphism (rs6971) in the TSPO gene which has been shown to reduce binding affinity of tracers similar to GE180.

Primary Outcomes

Description: We will use a linear regression model to assess whether regional microglial activation is predictive of cognitive performance in domains of memory, visuospatial function, language, and executive functioning. These differing units of measurement collected through neuropsychological evaluation will be aggregated into one model in order to assess the correlations between regional activation and cognitive performance in any different domains.

Measure: Linear Regression Model Assessing Cognitive Performance and Regional Microglial Activation

Time: Baseline

Description: We will use repeated measures analyses to asses whether there is a significant change in microglial activation between year 1 scan and year 2 scan. We will then assess if this change in microglial activation over this time period relates to changes in cognitive measures.

Measure: Repeated Measures Analyses to Asses Change in Microglial Activation Over Time

Time: Baseline (Year 1) compared to Year 2

Description: We will use a linear regression model to assess whether global microglial activation is predictive of overall cognitive performance (as assessed with scores on the Dementia Rating Scale (DRS) and Montreal Cognitive Assessment (MoCA)).

Measure: Linear Regression Model Assessing Cognitive Performance and Global Microglial Activation

Time: Baseline

18 Positron Emission Tomography (PET) Imaging Study in Relapsing-Remitting and Primary-Progressive Multiple Sclerosis (MS): Correlations With Advanced MRI in MS

While both conventional and advanced MRI techniques offer important insights into MS pathophysiology, important aspects of this inflammatory disorder are undetectable with existing MRI technology. In Multiple Sclerosis (MS), there is growing interest in PET as an imaging modality that can increase the investigator's understanding of the disease processes and may add to an understanding of MS phenotype, particularly when combined with advanced MRI techniques such as myelin water imaging.

NCT03787446 Multiple Sclerosis
MeSH: Multiple Sclerosis Sclerosis

- Mixed affinity binder according to rs6971 TSPO polymorphism1.

Exclusion Criteria: - Low and high affinity binders according to rs6971 TSPO polymorphism - Subject pregnant or breastfeeding.

A separate pre-screening consent form will be issued for the TSPO rs6971 polymorphism and eGFR blood samples, a separate pre-screening step.

Eligible participants, according to their TSPO rs6971 polymorphism will be presented a separate study consent form to continue into the clinical trial.

Primary Outcomes

Description: To show an increase in 11C-PBR28 binding in all sub-types of MS compared to healthy controls.

Measure: Whole Brain PBR28 binding

Time: January 2020

Secondary Outcomes

Description: To quantitatively measure the brain levels of water located within myelin

Measure: Myelin Water Imaging by MRI

Time: January 2020

Description: To correlate brain levels of inflammation measured by 11C-PBR28 with Retinal Nerve Fiber Layer (RNFL) thickness on Optical Coherence Tomography (OCT).

Measure: Optical Coherence Tomography

Time: January 2020

Description: To correlate brain levels of inflammation and myelin measured by PET with cognitive dysfunction in MS patients.

Measure: MS Spectroscopy

Time: January 2020

19 Imaging the Neuroimmune Effects of Acute Opioid Administration

In this study, a novel human laboratory model will be evaluated. Preclinical research indicates acute opioid administration evokes an immune response in the periphery and brain. Here, we will translate those preclinical findings to healthy human volunteers and quantify the neuroimmune response to a morphine challenge (Specific Aim). To measure the neuroimmune system, we will use [11C]PBR28 positron emission tomography (PET) imaging to quantify 18kDa translocator protein (TSPO) availability. TSPO is an imaging marker of the neuroimmune system shown to scale with microglia levels. Up to twenty healthy volunteers will complete two 120-minute [11C]PBR28 PET scans. Subjects will complete one scan prior to, and one scan 2-hr after, a single morphine injection (0.07 mg/kg i.m.). Specific Aim: To determine whether an acute morphine injection increases TSPO availability in healthy volunteers. Hypothesis: Relative to baseline, morphine will significantly increase whole-brain TSPO availability, consistent with a neuroimmune response.

NCT03801629 Drug Effect Drug: Intramuscular Morphine

8. 'Low affinity binding' individuals based on rs6971 polymorphism (<10% of the population).

Primary Outcomes

Description: The percentage change in 18kDa translocator protein (TSPO) availability from pre-Morphine to post-Morphine measured via PET [11C]PBR28 scans

Measure: Morphine-induced Change in TSPO availability

Time: One 120-minute PET [11C]PBR28 scan before and the other ~2 hours after morphine challenge

Secondary Outcomes

Description: The percentage change in Cogstate memory performance

Measure: Morphine-induced Change in Memory Proficiency

Time: The Cogstate Battery will be administered twice: once before and once ~1 hours after the morphine challenge

20 An Experimental Medicine Study to Validate the 18 kiloDalton Translocator Protein (TSPO) as a Novel Neuroimmunodulatory Target in Multiple Sclerosis

In multiple sclerosis (MS) cells of the immune system attack the brain causing tissue damage. In secondary progressive MS (SPMS) these repeated immune attacks have stopped but despite this new damage continues to appear. TSPO is a protein found in the brain and cells of the immune system, whose levels increase during MS. The investigators would like to know whether drugs that bind TSPO could dampen the immune responses in patients with SPMS. The investigators will be testing two drugs that affect TSPO; etifoxine and XBD173. Subjects with SPMS will be recruited from neurology clinics at hospitals associated with Imperial College Healthcare NHS Trust. Healthy volunteers will also be recruited in order to provide a comparison to these patients. The volunteers recruited will be invited to the clinical research facility (CRF) at Hammersmith Hospital. The volunteers will take one of the two drugs every day for 7 days. The researchers will perform blood tests before the first dose and after the last dose to investigate the effects of the drugs, including the expression of genes and immune cell activity. This will allow the researchers to explore which of the two drugs produces the greatest changes in the amount of TSPO in the blood in MS patients relative to healthy controls.

NCT03850301 Multiple Sclerosis Drug: XBD173 Drug: Etifoxine
MeSH: Multiple Sclerosis Sclerosis

b To explore the potential dependence of these pharmacodynamic responses on variation at rs6971 (a common polymorphism influencing ligand binding affinities in the TSPO protein) in the TSPO gene.

Primary Outcomes

Description: Plasma cytokine concentrations

Measure: Monocyte phenotye - Tissue necrosis factor-α

Time: 7 days

Description: Plasma cytokine concentrations

Measure: Monocyte phenotye - Interferon-γ

Time: 7 days

Description: Plasma cytokine concentrations

Measure: Monocyte phenotype - Interleukins- 1β

Time: 7 days

Description: Plasma cytokine concentrations

Measure: Monocyte phenotype - Interleukins- 16

Time: 7 days

Description: Plasma cytokine concentrations

Measure: Monocyte phenotype - Interleukins- 17

Time: 7 days

Description: Plasma cytokine concentrations

Measure: Monocyte phenotype - Interleukins- 23

Time: 7 days

Description: Transforming growth factor-β

Measure: Immunomodulatory factor -Transforming growth factor-β

Time: 7 days

Description: Interleukins -4

Measure: Immunomodulatory factor - Interleukins -4

Time: 7 days

Description: Interleukins - 10

Measure: Immunomodulatory factor - Interleukins - 10

Time: 7 days

Description: Flow

Measure: Relative proportions of WBC subsets

Time: 7 days

Secondary Outcomes

Description: Genome, proteome, metabolome

Measure: Monocyte phenotype - 'omic analyses

Time: 7 days

Description: Plasma levels of neurofilament

Measure: Neurofilament

Time: 7 days

21 Neuroinflammation After Myocardial Infarction - Imaging Substudy

The purpose of the study is to see if positron emission tomography and magnetic resonance imaging (PET/MRI) with an investigational drug called [18F]DPA-714 will show inflammation in the brain after a heart attack. This study may help physicians and researchers better understand the role of brain inflammation in heart disease and develop new treatments to protect the brain.

NCT03968445 Myocardial Infarction Drug: [18F]DPA-714-PET/MRI
MeSH: Myocardial Infarction Infarction
HPO: Myocardial infarction

English speaking with at least 8th grade education 4. High or mixed affinity binder for TSPO ligands based on genotyping for single nucleotide polymorphism (SNP) rs6971.

Diagnosis of dementia 12. Low affinity binder for TSPO ligands based on genotyping for SNP rs6971.

Primary Outcomes

Description: The regional brain concentrations of [F-18]DPA-714, a PET imaging marker of neuroinflammation, will be compared between study participants who have recently been hospitalized for acute myocardial infarction (AMI) and a control group undergoing elective percutaneous coronary interventions (PCI).

Measure: TPSO-PET measurement of neuroinflammation after acute myocardial infarction

Time: 2 years

22 PBR28 Brain PET Imaging With Lipopolysaccharide (LPS) Challenge for the Study of Microglia Function in Alzheimer's Disease

To examine the differences in the capacity to activate microglia in patients with Alzheimer's Disease (AD) compared to age-comparable cognitively normal subjects and younger healthy controls.

NCT04057807 Alzheimer Disease Drug: LPS
MeSH: Alzheimer Disease
HPO: Alzheimer disease

- BMI > 35 or < 19 - Women who are pregnant or nursing, or fail to use one of the following methods of birth control unless she or partner is surgically sterile or she is postmenopausal (hormone contraceptives [oral, implant, injection, patch, or ring], contraceptive sponge, double barrier [diaphragm or condom plus spermicide], or Intrauterine Device (IUD) - Individuals who are classified as "low binders" for the rs6971 polymorphism (<10% of the population) - Patients on antiplatelet and anticoagulant medications will be excluded.

Primary Outcomes

Description: Th primary outcome is MARI (calculated in the parietal ROIs) in AD patients compared to elderly controls. The investigators will use 7 AD and 7 comparably aged cognitively normal successfully scanned subjects to calculate the microglial activation reserve index. It is expected that there will be significant differences between the two groups suggesting Altered reactivity of the microglia in AD.The result would be an exciting one suggesting at least one mechanism by which some patients with significant amyloid load have progressive dementia while comparable others are either cognitively normal or have stable MCI. It will also suggest avenues for intervention in amyloid positive MCIs to prevent progression to Alzheimer's dementia

Measure: An altered reactivity of microglia

Time: 180 minutes post intervention

Secondary Outcomes

Description: The investigators will evaluate the effects of aging on MARI. Comparisons will be made for MARI between cognitively normal elderly and the 8 healthy individual to whom the researchers applied this protocol in an earlier study. The reactivity of microglia is reported to change with age (11) and so MARI is expected to change in the cognitively normal elderly. However, it is expected that the differences between the young and elderly cognitively normal subjects to be small relative to the comparison of AD and elderly normal controls.

Measure: Effects of aging on MARI

Time: 180 minutes post intervention

Description: The investigators will look at the relationship of regional and global amyloid load to MARI. The presence of a relationship suggests that one of the reasons for altered microglial reactivity might be interactions of microglia with pathologic amyloid.

Measure: Effects of amyloid on MARI

Time: 180 minutes post intervention

Description: The investigators will explore whether MARI would correlate with measure of disease stage, with higher MARIs associated with worse neuropsychological score and more severe disease. The investigators will look for correlations between MARI and the individual neuropsychological scores. This would determine if disease severity is correlated with microglial activation reserve.

Measure: Effects of MARI on cognition

Time: 180 minutes post intervention

23 An Open-label, Adaptive Design Study in Patients With Amyotrophic Lateral Sclerosis (ALS) to Characterize Safety, Tolerability and Brain Microglia Response, as Measured by TSPO Binding, Following Multiple Doses of BLZ945 Using Positron Emission Tomography (PET) With the Radioligand [11C]-PBR28

It is an open label study to evaluate safety, tolerability and brain microglia response in ALS patients following multiple doses of BLZ945.

NCT04066244 Amyotrophic Lateral Sclerosis Drug: BLZ945
MeSH: Motor Neuron Disease Amyotrophic Lateral Sclerosis Sclerosis
HPO: Abnormal anterior horn cell morphology Amyotrophic lateral sclerosis

8. High-affinity binders (HAB) or mixed-affinity binders (MAB) to TSPO as evaluated by genotyping for the rs6971 polymorphism in the TSPO gene at the screening visit.

Primary Outcomes

Description: Volume of distribution (Vt) in different brain regions for each [11C]-PBR28 PET scan, and change after BLZ945 treatment, compared to baseline. Evaluate brain microglial reduction, as measured by reduction in TSPO binding following oral doses of BLZ945 in ALS subjects by using PET imaging with [11C]-PBR28.

Measure: Change from baseline in volume of distribution (Vt) in different brain regions for [11C]-PBR28 PET scan

Time: Day -42, up to Day 22

Secondary Outcomes

Description: Measured by Cmax - The maximum plasma concentration of BLZ945

Measure: Plasma Pharmacokinetics (PK) of BLZ945 - Cmax

Time: Day 1; up to Day 17

Description: Measured by Tmax - Time to Reach the Maximum Concentration After Drug Administration of BLZ945

Measure: Plasma Pharmacokinetics (PK) of BLZ945 - Tmax

Time: Day 1; up to Day 17

Description: Measured by AUC - Area under the curve of BLZ945

Measure: Plasma Pharmacokinetics (PK) of BLZ945 - AUC

Time: Day 1; up to Day 17

Description: Measured by T1/2 - The elimination half-life of BLZ945

Measure: Plasma Pharmacokinetics (PK) of BLZ945 - T1/2

Time: Day 1; up to Day 17

Description: Urine renal clearance (CLR) of BLZ945

Measure: Renal Clearance (CLR) of BLZ945

Time: Day 1; up to Day 7

Description: To assess the CYP2C8 pharmacogenomic-pharmacokinetic relationship; CYP2C8 genotyping and BLZ945 plasma PK parameters

Measure: CYP2C8 genotyping and BLZ945 plasma PK parameters

Time: Day 1; up to Day 17

24 Imaging the Neuroimmune System in PTSD With PET

In this study, individuals with and without post-traumatic stress disorder (PTSD) will undergo one positron emission tomography (PET) scan using the radiotracer [11C]PBR28, which binds to the 18kDa translocator protein (TSPO). A subset of individuals who complete the first PET [11C]PBR28 scan will be invited to complete an inflammatory challenge and second PET [11C]PBR28 scan. Approximately 3 hours prior to the second [11C]PBR28 PET scan, lipopolysaccharide (LPS; endotoxin) will be administered to evoke a robust neuroimmune response. Subjects will also undergo behavioral and cognitive testing. Vital signs, subjective response, and peripheral biomarker levels will be assayed periodically throughout the experimental session. Specific aims: 1) Determine if individuals with PTSD exhibit neuroimmune system disruption relative to well-matched comparators at baseline. 2) Determine if individuals with PTSD exhibit a disrupted neuroimmune response after a classical immune stimulus relative to well-matched comparators. 3) Determine if LPS differentially alters cognitive function, subjective response, or physiological markers in individuals with PTSD compared to well-matched comparators. Hypothesis: Individuals with PTSD will exhibit a suppressed neuroimmune system at baseline and an attenuated neuroimmune response following LPS challenge.

NCT04236986 Post Traumatic Stress Disorder Drug: Lipopolysaccharide
MeSH: Stress Disorders, Traumatic Stress Disorders, Post-Traumatic

Individuals who are classified as "low binders" for the rs6971 polymorphism (<10% of the population) Inclusion Criteria: 1. Men and women, aged 18-55 years 2. Subjects with PTSD will have a primary, current diagnosis of PTSD according to DSM-V criteria (i.e., CAPS-5 ascertained diagnosis) 3. Able to read and write English and to provide voluntary, written informed consent Exclusion Criteria: 1.

Individuals who are classified as "low binders" for the rs6971 polymorphism (<10% of the population) Post Traumatic Stress Disorder Stress Disorders, Traumatic Stress Disorders, Post-Traumatic null

Primary Outcomes

Description: Time-activity curves will be extracted from brain regions of interest and analyzed using multilinear analysis-1 (t*=30) incorporating the metabolite-corrected arterial input function to yield [11C]PBR28 total volumes of distribution (VT) across brain regions.

Measure: Baseline TSPO Availability

Time: Before LPS administration (baseline)

Description: Time-activity curves will be extracted from brain regions of interest and analyzed using multilinear analysis-1 (t*=30) incorporating the metabolite-corrected arterial input function to yield [11C]PBR28 total volumes of distribution (VT) across brain regions.

Measure: Post-LPS TSPO Availability

Time: 3-hours after LPS administration (1.0 ng/kg; IV)

Secondary Outcomes

Description: Visual attention: response latency to identify card color (log10(ms); higher ~ worse attention). Visual learning: % of correctly identified repeat cards (arcsine(% correct); higher values ~ better learning). Verbal memory: # of correctly recalled items from a grocery list (3 trials). Verbal recall: # of correctly recalled items from a grocery list after a delay (1 trial; higher ~ better memory/recall). Executive function: number of errors navigating a 'hidden' maze (5 trials; higher ~ worse executive function). Visual-motor processing speed: response latency to detect a card flipped over (log10(ms); higher ~ worse processing speed). Working memory: % of correctly identified cards that matched the card presented either one- or two-cards previously (arcsine(% correct); higher ~ better working memory). Social cognition: response latency to identify the mismatched facial expression based on its emotional content (ms; log10; higher ~ worse social cognition).

Measure: Baseline Cogstate Cognitive Battery performance

Time: Before LPS administration

Description: Visual attention: response latency to identify card color (log10(ms); higher ~ worse attention). Visual learning: % of correctly identified repeat cards (arcsine(% correct); higher values ~ better learning). Verbal memory: # of correctly recalled items from a grocery list (3 trials). Verbal recall: # of correctly recalled items from a grocery list after a delay (1 trial; higher ~ better memory/recall). Executive function: number of errors navigating a 'hidden' maze (5 trials; higher ~ worse executive function). Visual-motor processing speed: response latency to detect a card flipped over (log10(ms); higher ~ worse processing speed). Working memory: % of correctly identified cards that matched the card presented either one- or two-cards previously (arcsine(% correct); higher ~ better working memory). Social cognition: response latency to identify the mismatched facial expression based on its emotional content (ms; log10; higher ~ worse social cognition).

Measure: Post-LPS Cogstate Cognitive Battery performance

Time: Approximately 1-hour after LPS administration

25 Measuring the Neuroimmune Response to Alcohol

This study uses positron emission tomography imaging of the 18-kDa translocator protein to measure the brain's immune response to alcohol.

NCT04251221 Alcohol Drinking Alcohol Use Disorder Drug: Oral Alcohol Challenge
MeSH: Alcoholism Alcohol Drinking

Specifically, we will exclude subjects who a) have a history of perceptual distortions, seizures, delirium, or hallucinations upon withdrawal or b) have a score of > 8 on the Clinical Institute Withdrawal Assessment scale at intake - Individuals who are classified as "low binders" for the rs6971 polymorphism (<10% of the population).

Primary Outcomes

Description: This is the percent change in [11C]PBR28 distribution volume post-alcohol relative to baseline. As a percent change, it could range from -10% to 200%.

Measure: Neuroimmune Response to Alcohol

Time: Measured 1-4 hours after oral alcohol challenge ends - Will require ~120 minutes

Description: This is the percent change in scores across the cogstate battery. These values could realistically vary much more widely, from -1000% to 1000% (although this extent is not expected).

Measure: Working Memory

Time: The morning following alcohol challenge - Will require ~30 minutes

Description: The percent change score in performance on the probabilistic response task. These values could realistically vary much more widely, from -300% to 300% (although this extent is not expected).

Measure: Anhedonia

Time: The morning following alcohol challenge - Will require ~30 minutes

26 Evaluation of in Vivo Neuroinflammation in Alzheimer's Disease Using Novel Positron Emission Tomography (PET/CT) Imaging

This research study is being done to learn more about inflammation in the brain using Positron Emission Tomography/Computed Tomography (PET/CT) imaging in people with Alzheimer's Disease/Mild Cognitive Impairment or healthy controls. If the subject agrees to be in this study, she/ he will have two types of PET/CT scans on the same day. The subject may have a screening visit before the PET/CT scan visit if the investigator needs to confirm the subject is able to be in the study. A blood sample will be taken before the scans. Additional blood samples will be taken during the PET scans. Subjects must also agree to have an MRI scan for this research study if she/he has not had a recent scan that the study doctor decides can be used for this study.

NCT04274998 Alzheimer Disease Healthy Volunteer Drug: [11C]PBR28 and[18F]NOS
MeSH: Alzheimer Disease
HPO: Alzheimer disease

3. A brain amyloid PET scan ≤ 1 year prior to enrollment in this study that is determined to be negative by the study PI. 4. High affinity carrier of the rs6971 TSPO polymorphism (whole genome sequencing is available from the UPenn ADC research cohort and will be interrogated for this polymorphism) 5. Mini-mental status exam (MMSE) score of 28 or higher per ADC database.

3. A brain amyloid PET scan ≤ 1 year prior to enrollment in this study that is determined to be positive by the study PI. 4. High affinity carrier of the rs6971 TSPO polymorphism (whole genome sequencing is available from the UPenn ADC research cohort and will be interrogated for this polymorphism) 5. Mini-mental status exam (MMSE) score of 14-27 per ADC database.

Primary Outcomes

Description: The primary outcome measure will be comparison of whole brain GM binding between controls and the MCI/AD group. the investigator will compare groups with a t-test. the investigator will evaluate the correlation of whole brain GM binding of 11C-PBR28 and 18F-NOS.

Measure: understanding the uptake of [18F]NOS in the human brain in AD/MCI and Healthy Controls and compare to same-day [11C]PBR28 uptake using PET/CT scan

Time: 3 years

Secondary Outcomes

Description: Secondary outcome measures for will include regional and voxel-wise comparisons between binding of the tracers. Correlation between regional 11C-PBR28 or 18F-NOS binding and either amyloid PET SUVR (calculated with cerebellar gray matter reference) or GM volumetric measurements will be evaluated using Pearson's r and rank sum correlation initially using false discovery rate (FDR)-corrected<0.05 statistical thresholds.

Measure: Comparing the patterns of [18F]NOS and [11C]PBR28 brain uptake with patterns of cerebral amyloidosis and neurodegeneration using PET/CT

Time: 3 years


HPO Nodes


Alzheimer disease
Genes 13
MPO HFE ABCA7 PSEN1 APOE APP A2M CACNA1G PSEN2 APOE PLAU GATA1 NOS3
Abnormal anterior horn cell morphology
Genes 18
ASAH1 TFG CPLANE1 CEP126 DCTN1 IGHMBP2 PRPH SMN1 SMN2 VRK1 SMN1 ATXN3 UBA1 SOD1 SMN1 NEFH SETX GLE1
Amyotrophic lateral sclerosis
Genes 77
MATR3 TREM2 VCP FUS PRPH ANXA11 ALS2 C9ORF72 HNRNPA1 PRPH PFN1 FUS UBQLN2 SQSTM1 ATXN2 MATR3 TBK1 CHMP2B SIGMAR1 PON1 OPTN MAPT MATR3 ANG VCP DAO ERBB4 SQSTM1 SPG11 NEFH EPHA4 CCNF ANG TARDBP DCTN1 PON2 SOD1 ANXA11 UBQLN2 GLT8D1 FIG4 OPTN DCTN1 TARDBP CHMP2B VAPB SIGMAR1 HNRNPA1 CFAP410 PFN1 PSEN1 HNRNPA1 SOD1 SPG11 C9ORF72 ALS2 TRPM7 ERBB4 CHCHD10 KIF5A VAPB PON3 FIG4 GLE1 NEK1 CHCHD10 PPARGC1A TUBA4A VCP UNC13A TBK1 VCP HNRNPA2B1 TAF15 FUS NEFH SETX
Schizophrenia
Genes 71
USH1C RTN4R USH1G HIRA UPF3B GJA5 DNAJC13 DNMT3A KRT86 HTR2A APOL4 CLRN1 DRD3 CEP78 ARSG MSTO1 TRNE PRODH RREB1 GIGYF2 PDZD7 MTHFR RBM12 ADGRV1 NKX2-1 TRNS2 KRT83 SNCA MYO7A COMT CIB2 PCDH15 WHRN TBX1 GP1BB DSG4 ZDHHC9 ARSA ARVCF WFS1 PRODH PSAP APOL2 SEC24C KRT81 LRRK2 CHI3L1 MYO7A ATP2A2 SHANK3 SYN2 EIF4G1 CHRNA7 GBA FLI1 MED12 VPS35 JMJD1C MSTO1 USH2A AKT1 GJA8 TBX1 COMT UFD1 PRODH DISC2 TBX1 HARS1 CDH23 DAOA
Autistic behavior
Genes 519
GRN GATAD2B ALG13 ARID1B STXBP1 TBC1D24 CUX2 SLC6A1 SCN9A PARS2 PRODH KDM5C GABRB3 IQSEC2 OPHN1 MKRN3 SCN1A CEP290 GABRA2 NDUFAF4 SCN1A SDHD DHCR7 NUBPL NDUFB10 YWHAG PROKR2 ADGRV1 MAOA GRIN1 UBA5 KCNA1 GRIA3 USP9X SCN3A DNAJC6 NLGN3 SLC35A3 OTUD6B GNAO1 MAN1B1 NDUFAF5 PGAP1 TUSC3 CAMTA1 GABRG2 CDKL5 NDUFV2 PPM1D PIGV MECP2 GPHN NDUFA11 HECW2 ALDH18A1 HIRA NUS1 PRSS12 MCTP2 CLIP2 NRXN1 PUF60 CNTNAP2 TRNF UBE3A NDUFS2 EP300 CHD1 PDE4D EXT2 SH2B1 UCHL1 SHANK3 CNNM2 PAK3 PIGW NDP PIGP IQSEC2 LHX1 TNIK RSPRY1 NSUN2 PTEN SCN2A TMEM216 TBL2 ST3GAL5 PTCHD1 DPYD RAB11B LINS1 SNORD115-1 RAI1 STXBP1 AP2M1 ARVCF AP3B2 RARS1 KDM5B SEC24C B3GALNT2 TMEM237 FRRS1L AGTPBP1 PODXL CLCN4 SLC9A7 SH2B1 MED23 ZC3H14 MBOAT7 JMJD1C STAG2 CDKL5 ND5 TMLHE EDC3 NAGA COMT TBR1 ZNF81 NONO HERC2 FMN2 SKI NAA10 DCPS METTL23 SOX2 PTCHD1 CXORF56 GTF2I MID2 SLC25A22 GJA5 MEIS2 TBX2 SNCA DEPDC5 SIM1 TRNH SLC35A3 NLGN3 PRDM16 FGFR1 GABRG2 RSRC1 NPAP1 GNAQ EZR NDUFAF3 TRNL1 PSEN1 NAA10 STS ND2 THOC2 CC2D1A KMT2A NDUFS1 GABRD AUTS2 GP1BB PRKN CACNA1B BCOR WASHC4 ND1 NDUFS4 RORA VCP NEUROD2 PINK1 PACS2 CHD2 NDUFA6 TRNS1 ALG13 CLP1 CARS2 TRAK1 GJA8 SYNGAP1 CHD2 MEIS2 NIPBL ADNP DPYD SETD2 TMEM231 ARFGEF2 WWOX MED12 NEXMIF NDN COX1 HESX1 RPS23 GABRB2 KCNA2 NHS C12ORF4 ST3GAL3 NDUFS6 RERE PCGF2 CTNNB1 MAPK10 CHD8 NEXMIF TCF4 SPECC1L NDUFB9 ALG13 PACS1 TRNW COX3 RREB1 IL1RAPL1 NLGN4X PCDH19 C9ORF72 TCF12 SIN3A TIMMDC1 CNKSR2 NUS1 MYT1 ASH1L FGF12 CTCF COX2 ARX LRRK2 TRAPPC9 FOXRED1 EEF1A2 CUX2 FRMPD4 TUBB3 POGZ NTRK2 TMEM126B TRIM8 MED13L NDUFAF1 SETD5 FBXO31 TSPAN7 MEF2C TBR1 CREBBP NDUFAF2 RPS6KA3 CLTC ANK3 AP1S2 SYN1 PRKAR1A SLC6A8 CHD2 SYNJ1 DYRK1A GRIK2 HCN1 SNORD116-1 IL1RAPL1 DHDDS OTX2 NDUFA1 NDUFB3 SON BAZ1B EHMT1 SCN8A BCKDK ZNF41 BCORL1 KCNA2 TREM2 MED25 PSMD12 WFS1 STX1B IREB2 ALDH5A1 ND4 RFC2 UBA5 RERE MAPK8IP3 ATRX CLCN4 GATM DLG3 FOXG1 PIGQ TRNQ SIK1 TBX1 PIGL GTF2IRD1 SIM1 CACNA2D2 NECAP1 MECP2 TLK2 CRBN ARX SMC3 CC2D2A NDST1 SATB2 MECP2 AUTS2 CDH15 NTRK2 ALG11 SQSTM1 SCN1B AGTR2 AIMP1 SNRPN PWRN1 IFNG SCN2A KDM6B NAGA SETD5 SLC25A12 PIGP PIGY ADNP ANKRD11 NDUFAF4 CYFIP2 GRIN2D CACNA1C MTOR DNM1 COG5 MAN1B1 NEUROD2 PIGC HNMT POLA1 PGAP2 UPF3B TMEM106B ELN CLCN4 MAPT KCNT1 FLCN PTEN DYM SMG9 TSC1 MICOS13 PARK7 SLC1A2 ZNF423 HNF1B HDAC8 SRY SLC45A1 TAF1 NFIB NDUFV1 ND6 HTRA2 CRADD KMT2C ADSL NALCN ACADL MECP2 ARNT2 ARHGEF6 USP27X SHANK3 NDUFA13 SMAD4 FMR1 NDUFB11 UFD1 DEAF1 EGF NDUFAF3 ATP1A3 TMEM138 TWNK SNRPN SNX14 TSC2 SLC13A5 AARS1 OTUD6B SDHC C12ORF4 CLIP1 IPW PLXND1 GDI1 NDUFS7 VPS13C CASK AP3B2 FTSJ1 SLC9A6 EHMT1 SYP TAF1 DDX3X FMR1 SH2B1 PIGL HDAC4 ARV1 EP300 NLGN4X TRRAP DMD POLA1 TRNS2 HIVEP2 PIGO RNF135 HNRNPH2 SLC25A1 ALMS1 TM4SF20 FTSJ1 STS CHRNA7 NAA15 LIMK1 TCF4 GAMT MEF2C KMT5B ST3GAL3 MED12 POMT1 HCN1 CACNA1A NDUFS3 PDE4D DHCR7 SMC1A MECP2 MBOAT7 AKT1 TRIO PAH SCN8A NDUFS8 ACOX1 PGAP3 CHMP2B GRIA3 MAGEL2 WARS2 SLC35C1 MKRN3-AS1 RAD21 AFF2 ND1 IQSEC2 GABRD TBX1 ZNF711 ASXL3 PWAR1 GABRA5 PPP3CA HERC2 TECR KLLN SLC6A8 SEC23B SZT2 PNKP ZBTB20 PIK3CA REV3L FRMPD4 ZFPM2 ND3 ACTL6B ST3GAL5 SEMA3E WFS1 CNKSR2 FOXP2 SARS1 TCF20 CXORF56 CNTNAP2 CHD7 PPP2CA SOX3 GFM1 SDHB KCNAB2 KCNB1 ATP6V1A TBC1D23 SYNGAP1 MSTO1 RAB39B HCN1 LMAN2L DNM1 ACSL4 TBX1 NDUFS4 HCFC1
Psychosis
Genes 116
TWNK SNRPN GRN NAGS SNORD116-1 SLC7A7 PRKAR1A UPF3B TREX1 TREM2 TRNH WFS1 IPW CLN8 ALDH5A1 SPART PCDH19 ND4 AIP NPAP1 LMBRD1 TRNL1 MKRN3 SLC25A13 PSEN1 ABCD1 MECP2 C1R TRNQ NDP RPS6KA3 PTPN22 ZDHHC9 STAT4 ATXN7 TRNS2 PRDM8 VCP HMBS GSS DCAF17 PARK7 FCGR2B PDE11A ITM2B TBC1D7 ZFYVE26 SPP1 TRNS1 PANK2 SQSTM1 CTLA4 PDGFB PWRN1 USP8 MED12 SLC20A2 HFE NPC2 NHLRC1 SLC12A6 C9ORF72 NDN COX1 CHMP2B MAGEL2 CBS MKRN3-AS1 EPM2A TRNF VPS13A PAH ALDH18A1 PAK3 NPC1 ND1 USP8 TMEM106B PWAR1 MAPT PDGFB KCNT1 TRNW COX3 NDP ALAD GCLC CDH23 PCDH19 C1QA C9ORF72 PRNP CLN3 MYORG COX2 DNASE1 PPOX SLC6A19 SOBP DCAF17 SNORD115-1 WFS1 IRAK1 FCGR2A ND6 TTC19 SH2B1 MED12 GNAS DNMT1 ND5 CACNA1A ACADS HERC2 PDGFRB ATP13A2
Encephalitis
Genes 33
TMEM70 TLR4 SLC6A19 C4A BCL10 IL12A-AS1 XIAP STAT4 CCR1 IL12A IL23R RFX5 RFXAP SH2D1A BTK BTK IRF3 MEFV CIITA PRF1 ERAP1 ATRX L2HGDH RFXANK HYOU1 FAS LBR KLRC4 IKBKG IL10 STAT1 UBAC2 HLA-B
Autism
Genes 201
SNORD116-1 DHDDS OTX2 BAZ1B EHMT1 SCN8A BCKDK KCNA2 PARS2 KDM5C ALDH5A1 ND4 RFC2 IQSEC2 OPHN1 RERE ATRX MKRN3 GABRA2 GATM SDHD DHCR7 YWHAG PROKR2 MAOA TRNQ TBX1 PIGL GTF2IRD1 SIM1 UBA5 NECAP1 GRIA3 SMC3 SCN3A SATB2 NLGN3 SNRPN PWRN1 IFNG GABRG2 NAGA SETD5 MECP2 ANKRD11 CYFIP2 GRIN2D CACNA1C HIRA DNM1 MAN1B1 CLIP2 NRXN1 TRNF UBE3A EP300 ELN PDE4D FLCN SHANK3 PTEN DYM NDP LHX1 TSC1 PTEN SLC1A2 TBL2 DPYD HNF1B SNORD115-1 RAI1 STXBP1 HDAC8 ARVCF SEC24C NFIB ND6 ADSL SH2B1 JMJD1C MECP2 ARNT2 ND5 TMLHE SMAD4 NAGA FMR1 COMT UFD1 TBR1 NONO HERC2 SKI SOX2 SNRPN PTCHD1 TSC2 GTF2I SLC13A5 AARS1 GJA5 MEIS2 SDHC TRNH NLGN3 IPW PRDM16 FGFR1 PLXND1 AP3B2 FTSJ1 NPAP1 SLC9A6 EHMT1 TRNL1 FMR1 HDAC4 ARV1 STS KMT2A NLGN4X GABRD AUTS2 GP1BB CACNA1B TRNS2 ALMS1 STS CHRNA7 TRNS1 ALG13 LIMK1 GAMT TRAK1 GJA8 MED12 SYNGAP1 HCN1 CACNA1A PDE4D DHCR7 NIPBL SMC1A AKT1 PAH WWOX SCN8A NDN COX1 HESX1 GABRB2 MAGEL2 KCNA2 NHS SLC35C1 MKRN3-AS1 RAD21 CHD8 ND1 TBX1 PWAR1 GABRA5 PPP3CA TRNW COX3 RREB1 IL1RAPL1 NLGN4X TCF12 KLLN SIN3A NUS1 SEC23B SZT2 MYT1 FGF12 ZBTB20 PIK3CA COX2 REV3L EEF1A2 ACTL6B SEMA3E WFS1 CNKSR2 NTRK2 CNTNAP2 CHD7 SOX3 MED13L SDHB KCNAB2 KCNB1 ATP6V1A CREBBP CLTC TBX1 PRKAR1A SYNJ1 DYRK1A
Depressivity
Genes 377
AMACR BAZ1B PDCD1 PRKAR1A KCTD17 AFG3L2 DNAJC13 NSMF PRPH TBP DNA2 TOR1A UBQLN2 MED25 WFS1 TRNL1 ADH1C ND4 GNAS RFC2 FGF14 HMBS PLA2G6 SPAST PRKCG HTR2A SQSTM1 ATRX GABRA1 FGF8 FUS CLCN4 LMNB1 CLN6 TRNS2 GDAP2 PON2 GSN SNCA FAN1 XK TWNK PTS TRNQ RPS6KA3 TBX1 GLT8D1 OPTN PINK1 GTF2IRD1 NHLRC1 GBA TRNN PANK2 CRBN GNRH1 PSAP NDST1 GLUD2 SOD1 DNAJC6 LRRK2 DNMT1 PDE11A TAC3 DRD2 MAN1B1 HTT AP2S1 SPRY4 PGAP1 CBS SQSTM1 TOR1A AIMP1 TUSC3 PDGFB TWNK FMO3 SLC20A2 MECP2 CACNA1G CDH23 C9ORF72 FUS GPR35 TARDBP C9ORF72 HIRA IDUA HLA-DQB1 PRSS12 C9ORF72 CLIP2 PIGC HNMT JRK TRNF PAH CLRN1 ATXN2 CPOX CEP78 MSTO1 ELN CLCN4 CISD2 PROK2 PDGFB SGCE SLC6A4 KCNT1 PDGFRB UCHL1 MATR3 GABRG2 SMPD1 PRNP GNRHR KISS1R COQ2 HS6ST1 TNIK NEFH MAPT C9ORF72 ATP13A2 PARK7 NSUN2 SLC25A4 CCNF ANXA11 HLA-DQB1 TBL2 CPOX SNCAIP FIG4 TARDBP NOTCH3 LINS1 VAPB BMPR1A ARVCF SLC18A2 C19ORF12 MAPT ATXN10 POLG SLC45A1 KDM5B MST1 SEC24C B3GALNT2 MLH3 PPT1 FRRS1L JPH3 WDR11 PODXL ND6 ARMC5 HTRA2 AIP CRADD TTC19 MED23 ZC3H14 JMJD1C PRNP USH2A ATP1A3 TRNS1 ND5 EDC3 COASY UNC13A COMT UFD1 VCP POLG FMR1 PMS1 FMN2 PRNP PRNP CHD7 DCPS METTL23 DCTN1 TRNL2 GBA PPP2R2B ATP7B GTF2I USH1G PTPN22 SRPX2 TACR3 TWNK GNA11 TMEM106B SNCA CSF1R MLH1 TRNH PMS2 CLIP1 POLG2 ATXN8OS CASR VPS13C PON1 RSRC1 PPOX VCP HLA-DRB1 EZR DUSP6 BCS1L DCTN1 EHMT1 TRNL1 PRNP PDZD7 MSH6 MAPT EPHA4 POLG THOC2 CRKL CYP27A1 PLA2G6 ANG CC2D1A DCTN1 MYO7A CACNA1H HTT DNAJC5 COQ2 GRIN2A GP1BB DGUOK PRKN CHMP2B KRAS ARSA NR4A2 HNRNPA1 CHMP2B WASHC4 TRNS2 ATXN10 MSH2 CFAP410 PFN1 HMBS CACNA1G GNAS MYO7A SLC2A1 PINK1 POLG C9ORF72 PSEN1 ANOS1 PIK3CA ALMS1 TBC1D7 VCP TRNS1 PANK2 GBA TK2 LIMK1 CHCHD10 XPR1 PPARGC1A RPS20 USP8 ST3GAL3 ARMC5 HARS1 KCTD17 TAF15 AARS2 PER3 FGF14 CTSF TBP MECP2 MBOAT7 POLG PAH TREM2 USH1C TREM2 COX1 TBK1 C12ORF4 WARS2 STX16 ATXN8 SGCE ND1 ATXN8OS PRKACA TBK1 ARSG MAPK1 ATXN2 GRN ABCA7 OCRL KCNJ2 TRNW CHCHD10 COX3 RREB1 DAO GIGYF2 GPR101 TECR CDH23 ATP1A3 EPCAM ADGRV1 GNAS TCF4 GNAS GABRG2 PRNP KISS1 TGFBR2 SEMA4A TWNK GCH1 CIB2 COX2 FGFR1 PCDH15 WHRN LRRK2 TRAPPC9 RRM2B FMR1 RRM2B WFS1 FA2H FGF17 HBB PDGFRB SARS1 BCR EIF4G1 POLG ERBB4 GLA PER2 FBXO31 PON3 GLE1 PROKR2 VPS35 NEK1 MSTO1 LMAN2L GNAS DNMT1 GABRB3 CP TBX1 EPM2A PDGFRB GRIK2 SNCA VCP
Neurodegeneration
Genes 81
PRNP TREM2 CSF1R WDR45 ATXN3 PRPH GM2A UBTF UBQLN2 ATXN2 TBK1 PON1 FTL ADAR TREX1 MATR3 ATXN3 GM2A DAO RNASEH2C SQSTM1 UCHL1 MFSD8 TANGO2 NEFH ABCD1 PLA2G6 EPHA4 IFIH1 COQ2 RNASEH2A CCNF ANG DCTN1 PON2 ANXA11 ZBTB20 GLT8D1 FIG4 ATXN3 OPTN TARDBP CHMP2B VAPB IDS HNRNPA1 C19ORF12 PANK2 GALC CFAP410 PFN1 TXN2 SOD1 IDUA C9ORF72 NBN ERBB4 FA2H TTC19 PON3 GLE1 NARS2 NAXD NEK1 CHCHD10 PPARGC1A FOLR1 RNASEH2B GUSB PDE8B MAPT COASY UNC13A PLA2G6 LYST VCP PCNA TAF15 FUS AARS2 SAMHD1
Myocardial infarction
Genes 79
IL12B TLR4 LDLRAP1 LDLR GTF2I GLA APOB STAT4 CCR1 BAZ1B IKZF1 TP53 SH2B3 CLIP2 ABCG8 CYP27A1 MYH9 CTNNB1 HLA-B AGPAT2 ELN FOS RFC2 ENPP1 CAVIN1 ERAP1 MEF2A MYH9 BCHE CAV1 MEFV LRP6 LMNA HLA-B LPL THOC2 CYP27A1 KLRC4 TET2 IL10 SCNN1B UBAC2 CEP19 HLA-B PIGA TBL2 CFTR RAF1 MPL BRAF C4A GTF2IRD1 IL12A-AS1 CALR IL12A IL23R JAK2 SCNN1A ABCA1 WRN JAK2 SCNN1G HGD PTPN11 MEFV BSCL2 CBS LIMK1 ABCA1 DYRK1B BRAF SLC2A10 SH2B3 PPARG PCSK9 FAS ABCG5 MLX ABCC6
Mental deterioration
Genes 462
TIMM8A PRNP GRN SCN9A CSF1R WDR45 RNASEH1 PRKAR1A CHMP2B SCN1A SLC6A1 CYP27A1 ATP1A3 DNAJC13 ND1 OPA1 SNCA QDPR TRNS1 APOL4 CTC1 SNORD118 DRD3 ADH1C PARS2 APOE TYMP GABRB3 BSCL2 CPLX1 FUS LMNB1 ERCC4 GABRA2 AP5Z1 COX2 SCN1A TIMMDC1 SNCA YWHAG TRNQ IRF6 UBA5 GBA DNMT1 PSAP HNRNPA1 APOL2 SCN3A DNAJC6 DNMT1 PDE11A SYN2 ITM2B RAB27A HTT SUMF1 ATP6V1E1 GABRG2 SDHA COX3 GBA2 HEXB WFS1 TYROBP C9ORF72 RRM2B NPC2 SURF1 PNPLA6 NHLRC1 DAOA ERCC6 SCARB2 C9ORF72 CNTNAP2 UBTF HTT RNF216 PDGFRB UCHL1 PRNP HNRNPA2B1 LRRK2 NDUFS2 CYTB MFSD8 TINF2 APP APP CLN3 ATP13A2 PSEN1 ASAH1 ATXN3 SNCAIP BSCL2 DCAF17 NOTCH3 STXBP1 GBE1 AP2M1 GALC ATP6 IDUA HSD17B10 PPT1 JPH3 PSEN1 TTR PODXL PSEN1 APP COX1 PRNP APP COASY CTSD SPG11 GRN PRNP ATP13A2 POLG DCTN1 CHMP2B PPP2R2B SDHAF1 HEXA CST3 TWNK ATP6V0A2 GRN XPA TMEM106B SNCA CSF1R MATR3 PRNP MAPT CHMP2B AMN MAPT ERCC2 COL18A1 APP MAPT CSTB TRNK C19ORF12 MTHFR PSEN1 CP UBQLN2 TREM2 CLN8 PRKN CACNA1B ARSA NR4A2 ATN1 PRDM8 VCP RBM28 PSEN1 FA2H PINK1 PLAU TRPM7 CFAP43 HFE VCP GBA NDUFB8 ATP7B NDUFA6 XPR1 TUBA4A TRAK1 AKT1 SYNGAP1 CHD2 HNRNPA2B1 CERS1 AARS2 CTSF TBP SYNJ1 SERPINI1 MATR3 TRNL1 WWOX GABRB2 MAPT PSAP ABCA7 KCNA2 TRNC ALDH18A1 NOTCH3 MAPK10 PLP1 GRN FTL CHCHD10 TMEM106B TTPA VCP C9ORF72 TIMM8A NUS1 FGF12 PSEN2 FBXO7 LRRK2 HIBCH EEF1A2 PANK2 CUX2 FMR1 PRKAR1B PDGFRB NTRK2 CHI3L1 ND5 MAPT EIF4G1 HEPACAM VPS35 SPG21 GNAS TREX1 CLTC ALDH18A1 EPM2A PDGFRB CHD2 SYNJ1 GBA PRDX1 ATXN2 PRICKLE1 DHDDS RTN4R SLC13A5 ZFYVE26 NRAS POLG SCN8A HNF1A KCNA2 TREM2 TBP HTR2A SQSTM1 WFS1 TREM2 CLN8 PLA2G6 SPAST PRKCG NDUFAF3 RNF216 CLN6 PLA2G6 GDAP2 GBA PSEN1 SUMF1 HTRA1 TARDBP NDP PINK1 MFN2 NECAP1 NHLRC1 VPS13C ATXN7 ND6 PANK2 PSAP GLUD2 PTS GCH1 LRRK2 MECP2 NOS3 FA2H SQSTM1 ATXN2 ARSA TRNK SQSTM1 MAPT GRN APP RBM28 NOTCH2NLC PDGFB TBC1D24 PDE10A KCTD7 TRNV MAPT ACTB MAPT RAB39B TREM2 ROGDI SNCA SLC20A2 MAPT ABCC8 CTNS TARDBP CYFIP2 GRIN2D CLN6 WDR45 DNM1 HLA-DQB1 ATP1A2 UBAP1 TRNW NPC1 ATP6 GLB1 GBA2 TRNE TMEM106B MAPT PDGFB GBA SNCA JPH3 SMC1A MAPT C9ORF72 PARK7 NAGLU APTX MYORG SDHD DNM1L SLC1A2 ROGDI PRDM8 C19ORF12 MAPT ATXN10 PLEKHG4 HTRA2 DARS2 HGSNAT COL4A1 SLC2A3 ATP13A2 MBTPS2 TRNF CUBN FMR1 NBN TLR3 TUBB4A GBA SLC13A5 TK2 SGPL1 AARS1 TREX1 TRNS2 KCNC1 SNCB VPS13C ATP6V1A AP3B2 VCP RRM2B UCP2 DCTN1 GM2A SORL1 PRNP PRNP MAPT ABCD1 ARV1 PLA2G6 TBK1 HTT DNAJC5 DGUOK ARSA ATP13A2 CHMP2B CSTB SPG11 PSEN2 PSEN1 CISD2 CHCHD10 MPO ATXN7 ITM2B FTL HCN1 CACNA1A MCOLN1 PAH SPG21 KMT2A PPP2R2B ADA2 TREM2 TBK1 CHMP2B TYROBP EPM2A VPS13A ATXN8OS HNF4A SCO2 GABRA5 PPP3CA ATXN2 TOMM40 GIGYF2 PRNP APOE SZT2 COMT SDHB ADA2 SQSTM1 ACTL6B ST3GAL5 CNKSR2 FA2H C9ORF72 KCNJ11 CLN5 SYNJ1 TBP KCNB1 CFAP43 APP ATP6V1A ERCC8 GBA VCP DNMT1 DNM1 MMACHC A2M CP HTRA1 TBK1 ASAH1 DISC2 ATN1 RRM2B SNCA VCP